UFO11917.5prime Sequence
1149 bp (1026 high quality bases) assembled on 2012-06-29
> UFO11917.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGAATCCTACAATTTAT
TTGAGCTGCCTTATGGTCTTCTCAGTGTTTCTGCTGGGAAAGGTAAATGC
TGAGAACGAAGATGAGTTCGTCACAGAAAAACAGCGCCTATTTAGTGTGT
ATGGTGATTCTTCGGTTGATGAGGCCACCAAATACCGGAACATCGACAGC
CTGGTCACTTTCTACGATAAGTACTTCACTCGACTTCAGTTGAAACCGGA
CTTGAACACACGCGCCCATGATCTCTTGAGGCGTTACAAGGAGGAAAATG
CTCGTGTGGTCTTGGTGGACGGTACTCCCGCACAAGGCGGATTCTGGTTG
CCACTGGTGAAGCTACTCATTGTCCAGCTGGGCGTCGAAATTGCCTCTGA
GGGAGTCAAGCGTGCTATTGAATCCGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTCGC
CCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAAT
CAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATTCT
CATAACCCTTTAGGAAATAGGCCAGGTTTCACGTACACGCACATCTGCGA
TATTTGTGTAGAACTGCCGGAATCGTCGTGTATCACTCCAGAGCGATGAA
CGTTTCAGTTGCTCATGAAACGGTGTAACAAGGTGAACATACCATATCAC
AGCTCACGTCTTCATTGCATACGAATCGATGAACATCATCAGGCGGCAG
UFO11917.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:48:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotM-RB | 511 | CG14027-RB | 34..426 | 83..475 | 1965 | 100 | Plus |
| TotM-RA | 552 | CG14027-RA | 34..426 | 83..475 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5329958..5330338 | 95..475 | 1875 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:48:17 has no hits.
UFO11917.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:48 Download gff for
UFO11917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotM-RA | 34..429 | 83..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:16 Download gff for
UFO11917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotM-RA | 34..429 | 83..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:02 Download gff for
UFO11917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotM-RA | 34..429 | 83..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:02 Download gff for
UFO11917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5329890..5329912 | 83..105 | 100 | -> | Plus |
| 2L | 5329969..5330338 | 106..475 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:16 Download gff for
UFO11917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5329890..5329912 | 83..105 | 100 | -> | Plus |
| arm_2L | 5329969..5330338 | 106..475 | 100 | == | Plus |
