UFO11924.5prime Sequence
1141 bp (1001 high quality bases) assembled on 2012-06-29
> UFO11924.5prime
ATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTAT
AGCATACATTATACGAAGTTATCAGTCGACATGGCGTTGACTTACATCCT
TTTCCAAGTGGCGGTCGCCCTACTGGCGATCTTAACGTACTATATCCACC
GCAAGCTAACATATTTCAAGCGTCGAGGGATTCCCTTCGTTGCACCGCAT
CTCATCAGGGGAAACATGGAGGAATTACAAAAGACGAAAAATATCCACGA
GATATTCCAAGATCACTATAACAAATTCAGGGAAAGCAAGGCACCGTTTG
TTGGATTCTTCTTTTTCCAGAGTCCCGCTGCATTTGTGATAGATCTTGAA
CTGGCCAAGCAAATACTGATTAAGGACTTCTCGAATTTCTCGAACAAGGG
TATATTCTACAATGAAAAAGATGATCCCATTTCTGCCCATCTCTTCAATC
TGGACGGTGCCCAGTGGCGTTTGTTAAGGAACAAATTATCATCGACCTTT
ACATCCGGTAAAATGAAGTTAATGTATCCGACCGTAGTGTCAGTGGCCAA
TGAATTTATGACCGTGATGCACGAGAAAGTGCCGAAAAATTCGGTTCTGG
AGATACGTGATCTGGTGGCCAGGTTTACGGTGGATGTGATCGGAACCTGC
GCCTTTGGCATCCAGTGCAACAGTCTGCGCGATGAAAAGGCCGAGTTTCT
GTATTTTGGAAAGAGGTCTTTGGTTGACAAGAGACATGGGACTCTATTGA
ATGGCTTTATGCGCAGCTATCCCAAATTGGCCAGGAAATTGGGTATGGTT
CGAACTGCACCGCATATTCAGGAATTCTATAGTAGAATTGTCACAGAAAC
AGTGGCGGTGCGAGAAAAGAGCACATCAAACGCAACGATTTCATGGACAT
GCTGATTGACTTAAAATCAAAAGAATGACTCTAGAGATGCGATGTGTCAG
AGATACATGAGAGTTTGCACAGCTTGTGTCTCATGCTGCTTGAATCTCTC
ACATGGATGCTAACGACTGCAGATCGACTCAGATAGTCGCTAGTGGAGAG
TCTAAGCACTGCCACTACTAATGCAGATCGATCTACGTAGACGCATGACA
TGCATGTCAGGCAGTCATCGTCATCCAGTACGTACCTGTCA
UFO11924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:48:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a8-RA | 1781 | CG10248-RA | 30..910 | 80..952 | 4215 | 99.1 | Plus |
| Cyp6a18-RB | 4171 | CG13977-RB | 40..881 | 88..926 | 1235 | 77.3 | Plus |
| Cyp6a18-RA | 1730 | CG13977-RA | 40..881 | 88..926 | 1235 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:48:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14888151..14888981 | 909..80 | 4105 | 99.9 | Minus |
| 3R | 32079331 | 3R | 27478714..27479543 | 88..916 | 1160 | 76.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:48:04 has no hits.
UFO11924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:45 Download gff for
UFO11924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 25..909 | 72..952 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:09 Download gff for
UFO11924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 26..910 | 72..952 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:55 Download gff for
UFO11924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 26..910 | 72..952 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:55 Download gff for
UFO11924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14888101..14888985 | 72..952 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:09 Download gff for
UFO11924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10775606..10776490 | 72..952 | 98 | | Minus |
