UFO11925.5prime Sequence
468 bp (422 high quality bases) assembled on 2012-06-29
> UFO11925.5prime
ATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTAT
AGCATACATTATACGAAGTTATCAGTCGACATGGCTAATTGCAATCTGGT
TAAAGTATTTCTGTTGGTAACATTACTCGGCCTAAGTCTTATGCCATTTT
GCCAGGCACATCCAAAACGCGGTCGTAAGCGTGCCTTTGGTGTGGGTCTT
TTGGGTGGAGCTTTAGCTGGCGCTGTCATTGGCAACGTTGTGGCCAAGTC
TCAACAGGCTCCCGCTGCCGCTCCTGCTGCTCCGGTAGCCGTAGTGCATC
ACCACTATCCGCCAGGTGCTCCTGCAGCACCTGCTCCGGCATCCCAGCCA
GATCCCAAAAAGATGACTGTCATCGAAACTGGCACACCCGATGCCAACGG
ATGCTACACGCAAACTATTTCGGGAACCCCAATCCCAGCAATTCAAAATC
CTATTACGGAAGACACAG
UFO11925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31496-RA | 1030 | CG31496-RA | 84..468 | 80..468 | 1815 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7345517..7345780 | 189..454 | 1200 | 98.5 | Plus |
3R | 32079331 | 3R | 7345152..7345263 | 80..191 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:48:38 has no hits.
UFO11925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:34:53 Download gff for
UFO11925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31496-RA | 84..468 | 80..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:29 Download gff for
UFO11925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31496-RA | 84..468 | 80..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:13 Download gff for
UFO11925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31496-RA | 84..468 | 80..468 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:13 Download gff for
UFO11925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7345152..7345261 | 80..189 | 100 | -> | Plus |
3R | 7345518..7345792 | 190..468 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:29 Download gff for
UFO11925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3170874..3170983 | 80..189 | 100 | -> | Plus |
arm_3R | 3171240..3171514 | 190..468 | 97 | | Plus |