UFO11954.5prime Sequence
1194 bp (1066 high quality bases) assembled on 2012-06-29
> UFO11954.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGGTGTGGACAAGCTG
CCCGAAATTCGAGCTCTTAGTGAAGTGGTTGAACCCCACGTTTCAGGGTC
CCGCCTCCTTAATTATCACACAAGCAGTCTGACGAAACCGGGCGATAACT
ACGGAAGCGTTCTCCTGGCAATTCATGCCCGGCTGCAGAAATCCAATGGT
GAGTCGTTTGAAGAGCAGCTGGTGGCTAAAGTGCCTCCGATCGACCCCAA
GTACTGGCAGTTTTTCCAGCCTGAGCAGACATGCCTCACTGAGAACGCTG
TTTACAAGATTTTGGCCCCTGCTCTGGCCACCCTTCAAGATGAAGCTGGC
GTCCCTGACGAGAGCCAATTTAAAGGATTCCCTCGCTTCTATGGCTGTCG
CGAATCCCTCGAATCCAACTCATCAAAGGTAGATCAAAATGCCGTGTTGG
TGCTGGAAAATTTGCGTAGCAGTGGCTACGTCTCCGGCCAGAGGCTAAAA
GCTTTCGATCTGGCCCACACGTTGCTAGCACTTAAATATATGGCCGAGTT
CCACGCCCTGTCTCTAGCTCTGCGGATCCTCAGACCAGAGGTGTTCCGGG
AACAGGTCCGTCCGTTCTTTAAAAAGTTCGATTGGCATGCTGAAGCGCCC
GAGTGGAAGTCGGTAATGAAGGCAGAGACTCTGGAGGACATTCGTCGAGC
CACCAACAACGACTCCAGACTTGTAGCCCGAATGAAAGAGTTGTCGGACC
AGTTTTTTGAATTCTTAGCAGCCGCCCCAGATAGACCCGATGGGCCTTTT
ACCAGCATTATACACTGTGACTTCTGGATAAATAATATAATGTTTCGTTA
CGGGCCCACTGGACACCCGTCGAGCTGAAATTATCGACTTTCAGACGGCA
CAGTACGATCAGTGTGCATGACATATCTCGTTTTGCTATCAAGCGTGATA
CGCTATCTGAGTAGAGTCGACACATGTTAGAGCTACTATGAGCTTTGACG
TTGTCTGCGACGTGTGGGAGCTAATGAGTCACACTTCAAGAGTCCGCTGA
GTGAGAGGGTGGCGTACTACAGTTCCCACGCATCTTATGACCGGCTTTAA
TTGCTGACGCGCCATCGGCGATCCAGCTGAGAGCCAGCTACGAC
UFO11954.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-RB | 2206 | CG31976-RB | 58..1194 | 81..1176 | 4680 | 96 | Plus |
| CG31975-RC | 2206 | CG31975-RC | 58..1194 | 81..1176 | 4680 | 96 | Plus |
| CG31975-RB | 1335 | CG31975-RB | 58..1194 | 81..1176 | 4680 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 140113..140935 | 903..81 | 4115 | 100 | Minus |
| 2L | 23513712 | 2L | 139855..139955 | 996..902 | 205 | 94.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:49:38 has no hits.
UFO11954.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:05 Download gff for
UFO11954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RC | 55..1069 | 76..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:09 Download gff for
UFO11954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31976-RB | 55..1069 | 76..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:50 Download gff for
UFO11954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RB | 55..1069 | 76..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:50 Download gff for
UFO11954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 140114..140938 | 76..902 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:09 Download gff for
UFO11954.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 140114..140938 | 76..902 | 99 | | Minus |
