UFO11958.5prime Sequence
1147 bp (1045 high quality bases) assembled on 2012-06-29
> UFO11958.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGAACAACAGCCCCAAG
GATCCCTATCGTGGAGGAGGAGGAGGTTCTGGACCCCAGGATGGCGCTGG
ATCGACCGGTGTGTCTATCAACATCGAGAGCGACGACAATGACTCGACGA
CGGCGGAACACGACTACCTGCTGCCTGCCTCCTCATCTTCGGTGACCTCT
GGTGGTGGCGTCGGAGGTGGAGGCGTCGTCTCTGGAGGATCGACCAGCAC
CAGCGTAAACCTGGACCACCAACACGTTCCCACGGCGCGGAGCAGCAGCC
TTAGTGGTGGTAATGTCCGTCATGGTAACATTCTATCCACATTTTTGGCC
CGTCAGCGCTCGTACACGCCAGCCAGCAACAGCAGTTCCCCGGTGCGGGT
GACCACACAGATGAACCGTCGTCTTCAGCAGTCCCGTAGTATGGGCGCCA
ACACCGGTGGCAGTCTCGAGGAGCCGTCCAGCGCCGGAGCAGCAGGTGGA
CCAGGAGCATCGCCAGGAACTGCGGCAGGTGTTCGACAAATGGGCTTTTG
GCGTGTCAACCTCAACGATGTCTTTTCGCTTTCAACTGCCTCGTCGACAG
AGGCGCTCCGATCCTTCATCTCACATTCCAATTTTAGATATCCACCTGCA
ACCACTGCAGCCCCCGCGGCACCAGGACCTCAGCCAGCCGCCAATCCCGT
AGACAACTCGCACATACTGCTCGGCCAGCAGCAACCATCAATGCCTGAGC
CAGTCAGCCCTCTGCGATACGGGCGCGTTTCGGCCGTATCTGGAGCCAGT
TCAGCTGGAGCTATGGGTAGAAGTATCTCGCTGCGTGAGGGTGAGATGCG
ACACAATCACAGCCTTAACGGAGGACGGCACAATGCCAGTGCCATAGGAC
TAAACAGCAATCCGGCGGCTCGACGACGCGAAGCAATGAAGCAGACTTGA
CGAAGCGATGGCACGTGAGACGGAGTGGAGTGCATCACAGAGCAGCAAGA
ATAATCAGAGATGACTCTCATCTCGGATGACATGTGTCGATTCTCAGCAT
TGGGCGAATCTGCCGCATAACTAACGCTCAGTTCACCAACACCTGCT
UFO11958.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13605-RB | 2174 | CG13605-RB | 68..1133 | 83..1116 | 4555 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:49:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24111436..24112322 | 969..83 | 4435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:49:18 has no hits.
UFO11958.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:01 Download gff for
UFO11958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 81..995 | 83..992 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:55 Download gff for
UFO11958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 68..982 | 83..992 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:39 Download gff for
UFO11958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 68..982 | 83..992 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:39 Download gff for
UFO11958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24111408..24112337 | 71..992 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:55 Download gff for
UFO11958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19937130..19938059 | 71..992 | 98 | <- | Minus |
