UFO11988.5prime Sequence
1135 bp (1069 high quality bases) assembled on 2012-06-29
> UFO11988.5prime
CTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGAGCTACTTT
TTCCACAACTGGAGCGTCCTTTGCCCTCGCTGCCATCGCTGCACTACACC
CTGTTTGCCTACAGGGAGGAGTTGCGACGCCGCGATGCCCCGTTCATGAA
GATGTCCACCATCAAGCTGCATCTCACGGACAACCTCATCCTGCAGACGA
TCAAGAACATCCGGCAGTATGACACCATCGAGATTATGAATCTCAACCAG
GAGATAAACTTCAAGCGGCGGCTGACCAAACAAATGAGGAAGGTGCGCAA
ACTGGAGAAGCTCGGCTTGCACATCGATCCCCGGAAACTCAACGAGGACG
GCAAATGGCACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTT
AGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATA
TGTGTAGAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAC
GTTTCAGTTGCTCATGGAAACGGTGTAACAGGTGAACACTATCCATATCA
CAGCTCACCGTCTTTCATGCATACGAATCGGATGACATCATCAGGGGGCA
GATGCATTAGCGATAACTGGGCTATTTCCTACGCT
UFO11988.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:51:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| halo-RB | 616 | CG7428-RB | 88..414 | 85..411 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1517735..1518061 | 411..85 | 1635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:51:10 has no hits.
UFO11988.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:24 Download gff for
UFO11988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RA | 113..455 | 74..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:05 Download gff for
UFO11988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RB | 77..419 | 74..416 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:34 Download gff for
UFO11988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| halo-RB | 77..419 | 74..416 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:34 Download gff for
UFO11988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1517730..1518072 | 74..416 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:05 Download gff for
UFO11988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1517730..1518072 | 74..416 | 98 | | Minus |
