UFO12018.5prime Sequence
837 bp (720 high quality bases) assembled on 2012-06-29
> UFO12018.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGAAATGGAAGACAAT
TGGTGGGTCACCAAGTTAAAGGCTCTGGAGTCGAAGCCACAAAGGCTGGA
TGCGCTGACCGCCATGAACTCAGCCATCGCAAAGGAGGCGGCTCTTCCGC
GTCAAATAATTGAACGCCTGCTGACCACGGACCAATTGTATGACTGCGCC
AATCCCGCCGCGGATTCCCATGTTCCCAAGGATCAGGCCGTGGACGTGAC
CCTGGAATTGCTGTGCCACTGCCTTGATCAGCTGGCGATGGACACCGCCG
ACGAGCAGCTGTCCAGTCTGCTAAGACGTGGCTTGACCCACTCGAATCCA
GCCTTGCGTGCCCAGGTGTTGGCCAGTTTGTTCAAGAAGCTGCTTCGCCA
GTTGACCGTCGGTCAGGTTCTCACCCTGCCCAACAATGAGCTTATTTTCC
TCATCTTGGACGAGCTGAAACAACCGGATACGCAGAGTACCTCTCTGGCC
ATCAATATCCTATCCATCGTGCTGCCTCAGCGAATCAGCAATGCCGATGT
GCAGCAAAGCTAGTACAGCTCCTAAAGCAAAATGAGATCGTGCGCTGTCG
CGCCTACGAATTGGCAGTGGTCCTGGCAGAAAAGTGCCACCTTACCTCAG
TGACGTTACATTTATTTCTGGATGCGGCTCCTCAACGAACTGGATAACGA
CGATGTTTTATTGCAGCTAGCCGTAATGGAGCTCTAGGCCACTACGAACA
AAGCATTGTCTGTCTACTGACGTCGTCCGTTTGAAAT
UFO12018.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12096-RC | 2985 | CG12096-RC | 70..806 | 83..814 | 3340 | 97.7 | Plus |
| CG12096-RB | 1830 | CG12096-RB | 70..806 | 83..814 | 3340 | 97.7 | Plus |
| CG12096-RA | 2040 | CG12096-RA | 280..1016 | 83..814 | 3340 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13159883..13160584 | 83..784 | 3170 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:52:03 has no hits.
UFO12018.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:36 Download gff for
UFO12018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 178..901 | 83..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:44 Download gff for
UFO12018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 280..1003 | 83..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:00 Download gff for
UFO12018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12096-RA | 280..1003 | 83..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:00 Download gff for
UFO12018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13159883..13160606 | 83..802 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:44 Download gff for
UFO12018.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13053916..13054639 | 83..802 | 98 | | Plus |
