UFO12019.5prime Sequence
1120 bp (986 high quality bases) assembled on 2012-06-29
> UFO12019.5prime
TCTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTT
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATCAAACGCAA
GTAAATAATTTCCTCAAGTGCTTCCTGCAAATCGATGAGCCGTCCAACCG
TTGGACATCACGTCACGACGGGGAGGATCTCGATGATAACGACCATGATC
ATGATCATGACGACGACAACGACGACGACGAGAGTGGCGTTCTGGTTGCC
AAGGTCACAGCCATGGTGGTGCTATTTTGCGCCAGCGCGATCTGCGGGTC
CATTCCCTTCTTGCTTAACCGTTGCTATCGCTGGACGGAAAACCAGACGA
ACGCACGATCCGCCATTGTGGTCAAATGCCTGCTGTACTTTGGAGGCGGC
GTCCTGCTAGCCACCACCTTTCTCCATCTCTTGCCCGAAGTTCAGGAGGT
CGTCGAAGAGCTGCAGGAGTGCGGCATCATCGGAGAGCTCACTTTTCCGC
TGGCCGAGCTTCTCATGTGCTGTGGCTTCTTCCTCATGTACTTCATCGAG
GAGGCCATGCACACGTATGTCCATCATCATCAGAAGGATGAGGCTGGCGC
CGCTTTCGAGCGGGGTCACAGCATCCGAAACAGCCACCTGCTGAAACCCA
CCGAAGGCAACGCTACCACACCCACAGCCCCACCGGCGCCATTGGCTGGC
ACCGCTGAACTTGGAACACTATCGGTGCAGAATCTCCTGCAAAACGATCT
GGAGCAGCAAAAGTTTGCTACCAAGCCACAGCAACAAGCTAATGGACACG
GACACAGCCACGGGCATGGACATGGACATAGCCATCTACCAGTAATCGCA
GACGATGCCGATGCGGGGGACATGTTGGCTTCATCTCTGCGCGGACTCTT
CATCGTTTCCGCTCTGTCGCTGCACGAACTCTTTGAGGGCATGTCCATTG
GCCTAGAGAGCTCGCCAGTTCGTGTGTTTATGTTCCGTGCGTTCCGCACA
CAAATGTCCTGCCTCTGCGTGGGCGATCCAGCTGATCTGCAGACCCGGAT
GTTAACTGTCGGTCTCCTATTGGTTGAACTTGCGGTGTAGCCTCTGGCTC
GGATCGGAAATTGATAATCA
UFO12019.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:52:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zip89B-RA | 2011 | CG6898-RA | 412..1394 | 84..1054 | 4545 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:52:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16306169..16307048 | 84..963 | 4385 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:52:06 has no hits.
UFO12019.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:37 Download gff for
UFO12019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip3-RA | 403..1404 | 79..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:46 Download gff for
UFO12019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip3-RA | 408..1409 | 79..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:02 Download gff for
UFO12019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zip89B-RA | 408..1409 | 79..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:02 Download gff for
UFO12019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16306165..16307166 | 79..1070 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:46 Download gff for
UFO12019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12131887..12132888 | 79..1070 | 97 | | Plus |
