UFO12031.5prime Sequence
1101 bp (933 high quality bases) assembled on 2012-06-29
> UFO12031.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGATCACCTGTTTGAG
AAACTGGCCGCTCCTGCTGAAACGCTTCTCGGTCCACCAGATCCACCAGT
TCACCCAACTGTCCGGCCGCTTCGAGCGTCCGCCTCAATCCGGTAAATCC
TCGCGGGATCCCTATCTCGTCACGGTGGTGCAGGGAAGATCGAAGAAGCC
GCGATTTCCGGGAGAGCGGTCCAATCAGCGTTTCGGCGAGGATAGCTGGT
TCGTCAGCTCCACGCCGCTGGCCGAGGTGATGGGCGTGGCCGACGGCGTG
GGCGGTTGGCGTGACTTGGGCGTGGATGCGGGTCGTTTCGCCAAGGAGCT
GATGAGCTGCTGTTCCGGGCAGACGCAGCTATCGGATTTCGATGGACGCA
GTCCCCGGAACATGCTCATCGCCGGCTTCCAGGAGTTGTCCCACCGGGAG
CATCCTGTTGTGGGTAGCAGCACTGCCTGCCTGGCGACGATGCATCGGAA
GGACTGCACCCTGTACACCGCCAATTTGGGGGACAGCGGCTTCTTGGTGG
TGCGAAATGGACGGGTGCTGCACCGCTCAGTGGAGCAAACCCACGACTTC
AACACGCCCTATCAGCTGACAGTGCCGCCGGAGGATCGGAAGGAGAGCTA
CTACTGCGACAAGCCGGAAATGGCCGTGTCCACGAGGCACTCCCTACTAC
CCGGTGACCTGATGCTCCTGGCCACCGATGGCTTGTTCGATAACATGCCC
GAGAGCATGTTGCTCAGTATATTGAATGGCCTAAAGGAGCGTGAGAGCAC
GATCTACTTGTGGGCGCAGCCGGGTGGTGGAGAGCCAGGAACTGTCCATG
AATGCCAGTTTCATCACATTCGCATCAGCAGGCACACATGTTTCATACTC
GGCGGCGGAACCCGATGACTCACCCTAATCTGTCAGGCGTCGAGGTGCAA
ATGCGCAGCTTCTAGACCATTCGTGGCCGCGGGCCCAGTAATGGCTAATC
CAATCTAAATCTATCAATCCACTAGCCTAGGAATCTGTCTGACATAGCTG
G
UFO12031.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fig-RA | 1180 | CG7615-RA | 97..1037 | 84..1004 | 4185 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:52:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29779523..29780356 | 912..84 | 3925 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:52:39 has no hits.
UFO12031.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:44 Download gff for
UFO12031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 370..1316 | 77..1004 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:06 Download gff for
UFO12031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 91..1037 | 77..1004 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:19 Download gff for
UFO12031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fig-RA | 91..1037 | 77..1004 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:19 Download gff for
UFO12031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29779416..29780362 | 77..1004 | 97 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:06 Download gff for
UFO12031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25605138..25606084 | 77..1004 | 97 | == | Minus |
