Clone UFO12033 Report

Search the DGRC for UFO12033

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:120
Well:33
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG34133-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12033.5prime Sequence

1152 bp (1034 high quality bases) assembled on 2012-06-29

> UFO12033.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGAGTAAGCTGGAAACG
GATTCGGACAGTTCAGAGGAGTTTTTCGATGCCGAGGACACTACGCCCAA
TCGCCATTCGACTTTGTGTCGAAAGCTGCCGCCCGAGGTGGCCCAGGAGT
TCATCTTTCCCGAGCCCGCCGTGAGAGTGAATGCCGCCGCCTCATCCGAC
AGCGATGCTACGCCCATTGGCGCTGGAACGCCCGCCACCCGGAGTCCCAC
TAATAGCCTGGGTGCCCGGCTAAAGCCGCAGGATGCAGGGGTCTTCGTTG
AGCCCAAGCCCGTGATAGGACCTTTGGGTAGACAGCGCTTTCACGAACTA
CGTCAGTGCATGCAAAACGATGAAGATGATAATCCAGGAAATACACTCAC
ACCTGATTCTCAGAATAGCTCAACGGATGGCATTTTTACCAACCGTTCGA
CGCATCCGTTTAAGGTCATTGAGACAGATGCGATGAGCATACAGAGCATG
ACATCACTGGGTCGCGTGGGCCGAATCTTGGCGGGCAGCATTGATCCATC
TGCTATAAGCATAGATCGCGAGTCCCTGGCCTCGTTGAATGCGCAACAGC
AGAAGCAGCAGGCGCAGCAGCAACAACAGGCGCAGCCTACATCGTCTACC
AGCTCCAATACTCCACCGAGCGTTGGAAACACCTCTTCCGGGATGAGCAC
GCCCAGGGTGTCGCCCAAGCATCAGCAGAGTGGTAAGGAAGTAGCCGCCA
CCACGACAGGGATTCCTAGTGCCGCATCCTCCGCGCAGAGCTCTGGTGTT
GGCTCGATGGTTTTGCAGGAACCAGATGTGATAGCAAGCACAAAGCTTGC
CCAGTCTAAAACTACTGATTCCATCACCTCGTCGGGACCCGTGGCGCCAC
GCGAAGAAAGAGAGTCTCGTAATTGCTCCATCAGTCTCAGATCAGTATAG
TCTTCCTCCTGCGACAACGAGACACTGATAGTGATACGCGTCTGTGAGAA
TGTGGCAGGTCTCAGCAAGCTGCGGATGACTTTGTCATGAATTCGAGAGC
TCTCTACATGCACCTAGTTCAGCCTCAATACCTGAACCTGTCTCTCACAA
AT

UFO12033.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:52:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 340..1404 79..1126 4825 97.8 Plus
CG34133-RE 4209 CG34133-RE 340..1404 79..1126 4825 97.8 Plus
CG34133-RB 3831 CG34133-RB 635..1314 464..1126 2915 96.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29871445..29871890 602..1040 1935 98.2 Plus
3R 32079331 3R 29869849..29870054 168..373 1030 100 Plus
3R 32079331 3R 29871236..29871377 461..602 710 100 Plus
3R 32079331 3R 29871060..29871149 374..463 450 100 Plus
3R 32079331 3R 29869704..29869793 79..168 435 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 17:52:44 has no hits.

UFO12033.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:35:45 Download gff for UFO12033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RC 331..1412 73..1140 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:10 Download gff for UFO12033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RE 336..1417 73..1140 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:23 Download gff for UFO12033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RE 336..1417 73..1140 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:23 Download gff for UFO12033.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29869700..29869793 73..168 96 -> Plus
3R 29869850..29870054 169..373 100 -> Plus
3R 29871060..29871149 374..463 100 -> Plus
3R 29871239..29871377 464..602 100 -> Plus
3R 29871446..29871999 603..1140 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:10 Download gff for UFO12033.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25695422..25695515 73..168 96 -> Plus
arm_3R 25695572..25695776 169..373 100 -> Plus
arm_3R 25696782..25696871 374..463 100 -> Plus
arm_3R 25696961..25697099 464..602 100 -> Plus
arm_3R 25697168..25697721 603..1140 95   Plus