UFO12062.5prime Sequence
987 bp (828 high quality bases) assembled on 2012-06-29
> UFO12062.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAGTCGACATGTCCCCCGGCGCCCATT
TGCAGATGTCCCCGCAGAACACTTCGTCCCTAAGTCAACACCATCCACAT
CAACAGCAACAGTTACAACCCCCACAGCAGCAACAACAGCATTTCCCTAA
CCATCACAGCGCCCAGCAACAGTCGCAGCAGCAGCAGCAACAGGAGCAAC
AGAATCCCCAGCAGCAGGCGCAACAGCAGCAGCAGATACTCCCACATCAA
CATTTGCAGCACCTGCACAAGCATCCGCATCAGCTGCAACTGCATCAGCA
GCAGCAACAACAACTCCACCAGCAACAGCAGCAACACTTCCACCAGCAGT
CGCTGCAAGGGCTGCATCAGGGTAGCAGCAATCCGGATTCGAATATGAGC
ACTGGCTCCTCGCATAGCGAGAAGGATGTCAATGATATGCTGAGTGGCGG
TGCAGCAACGCCAGGAGCTGCAGCAGCAGCGATTCAACAGCAACATCCCG
CCTTTGCGCCCACACTGGGAATGCAGCAACCACCGCCGCCCCCACCTCAA
CACTCCAATAATGGAGGCGAGATGGGCTACTTGTCAGCAGGCACGACCAC
GACGACGTCGGTGTTAACGGTAGGCAAGCCTCGGACGCCAGCGGAGCGGA
AACGGAAGCGAAAAATGCCTCCATGTGCCACTAGTGCGGATGAGGCGGGG
AGTGGCGGTGGCTCTGGCGGAGAGACACGTGTACACGAGCTGAGCATATG
CTTCTGTTGCAGACTACGTTGCACGTGAGTAACAAGCGGCAGGAGGTGCG
CGACGGGACCCCATGACCAAAATAGTCACAGGGCGGAGGGGACGTAGCAG
GGAGCTCCAGAGACGCGGAGTGGCGCGGACTCTCTCAACAGCGTTGCGCA
CATAGCTTGACATCAAGTATGCCGGGGGGCCATTAAG
UFO12062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-RM | 7490 | CG34412-RM | 394..1086 | 80..772 | 3450 | 99.9 | Plus |
| tlk-RG | 7243 | CG34412-RG | 1941..2632 | 81..772 | 3445 | 99.9 | Plus |
| tlk-RN | 4355 | CG34412-RN | 395..1085 | 82..772 | 3440 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3781655..3782345 | 82..772 | 3440 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-28 17:54:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2545 | 136..365 | 465 | 68 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2576..2988 | 131..547 | 390 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6951 | 136..362 | 387 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..7016 | 136..397 | 375 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2781 | 136..547 | 367 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..7200 | 136..545 | 306 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6869..7112 | 136..385 | 218 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2480 | 502..661 | 143 | 60.6 | Plus |
UFO12062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:03 Download gff for
UFO12062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RG | 1941..2632 | 81..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:06 Download gff for
UFO12062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RM | 387..1086 | 73..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:05 Download gff for
UFO12062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RM | 387..1086 | 73..772 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:05 Download gff for
UFO12062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3781655..3782345 | 82..772 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:06 Download gff for
UFO12062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3675688..3676378 | 82..772 | 99 | | Plus |
