Clone UFO12063 Report

Search the DGRC for UFO12063

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:120
Well:63
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptoho23B-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12063.5prime Sequence

532 bp (460 high quality bases) assembled on 2012-06-29

> UFO12063.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGAGAACGACGCCGGT
GAGAATGTTGATCTGTACGTGCCCCGCAAATGCTCGGCGTCCAACAGGAT
CATCCACGCCAAGGATCACGCCTCCGTGCAGCTGAGCATCGTGGATGTGG
ACCCCGAGACCGGTCGCCAGACCGACGGTTCCAAGACCTACGCCATCTGC
GGCGAGATCCGTCGCATGGGCGAGTCCGACGACTGCATCGTGCGTCTGGC
CAAGAAGGACGGCATCATTACCAAGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTTCT
CACCATTAAAAACGCCCGGCGGGCAACCGGACGGTTCTGAACAAATCCAA
TGTGAATTTCTGAAGGCCATTCCGGGATTTAT

UFO12063.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
RpS21-RD 415 CG2986-RD 99..341 83..325 1215 100 Plus
RpS21-RE 494 CG2986-RE 116..358 83..325 1215 100 Plus
RpS21-RB 619 CG2986-RB 75..317 83..325 1215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2856376..2856569 132..325 970 100 Plus
2L 23513712 2L 2856256..2856305 83..132 250 100 Plus
Blast to na_te.dros performed on 2014-11-28 17:54:16 has no hits.

UFO12063.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:04 Download gff for UFO12063.5prime
Subject Subject Range Query Range Percent Splice Strand
oho23B-RB 109..366 75..337 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:07 Download gff for UFO12063.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS21-RB 68..325 75..337 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:07 Download gff for UFO12063.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS21-RB 68..325 75..337 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:07 Download gff for UFO12063.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2856249..2856305 75..132 93 -> Plus
2L 2856377..2856576 133..334 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:07 Download gff for UFO12063.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2856249..2856305 75..132 93 -> Plus
arm_2L 2856377..2856576 133..334 98 == Plus