UFO12063.5prime Sequence
532 bp (460 high quality bases) assembled on 2012-06-29
> UFO12063.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGGAGAACGACGCCGGT
GAGAATGTTGATCTGTACGTGCCCCGCAAATGCTCGGCGTCCAACAGGAT
CATCCACGCCAAGGATCACGCCTCCGTGCAGCTGAGCATCGTGGATGTGG
ACCCCGAGACCGGTCGCCAGACCGACGGTTCCAAGACCTACGCCATCTGC
GGCGAGATCCGTCGCATGGGCGAGTCCGACGACTGCATCGTGCGTCTGGC
CAAGAAGGACGGCATCATTACCAAGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTTCT
CACCATTAAAAACGCCCGGCGGGCAACCGGACGGTTCTGAACAAATCCAA
TGTGAATTTCTGAAGGCCATTCCGGGATTTAT
UFO12063.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS21-RD | 415 | CG2986-RD | 99..341 | 83..325 | 1215 | 100 | Plus |
RpS21-RE | 494 | CG2986-RE | 116..358 | 83..325 | 1215 | 100 | Plus |
RpS21-RB | 619 | CG2986-RB | 75..317 | 83..325 | 1215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2856376..2856569 | 132..325 | 970 | 100 | Plus |
2L | 23513712 | 2L | 2856256..2856305 | 83..132 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:54:16 has no hits.
UFO12063.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:04 Download gff for
UFO12063.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
oho23B-RB | 109..366 | 75..337 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:07 Download gff for
UFO12063.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS21-RB | 68..325 | 75..337 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:07 Download gff for
UFO12063.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS21-RB | 68..325 | 75..337 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:07 Download gff for
UFO12063.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2856249..2856305 | 75..132 | 93 | -> | Plus |
2L | 2856377..2856576 | 133..334 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:07 Download gff for
UFO12063.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2856249..2856305 | 75..132 | 93 | -> | Plus |
arm_2L | 2856377..2856576 | 133..334 | 98 | == | Plus |