UFO12071.5prime Sequence
1108 bp (969 high quality bases) assembled on 2012-06-29
> UFO12071.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAGTCGACATGCTTTTAGGATTCAGCC
TTGAGATCGTGCCGCAGATCACTCATCTAGAAAAACTAGAGCTGAATGTC
CGAATGCATTCCAGTATCCTGGTCGAGCTGTGTAAACTGAATCCAAACCT
ACGAAGACTCATTCTAAGGAATTCCGAAATATTTGGCAGATTATCGGATA
TAGTACCTCATTGCAATCAACTGGAATATCTGAGCTTTGTGATGAAAGAG
GTAGATGCATCCGAGTACGTAGCCCTGGCCAATTTGCCGCAACTTAAGTC
ATTAATTCTGTGTGGCGAGCATCTCGAGGGATCGCTTGTGAAGCTTTTTA
ATCGCTTCCAAGAACACCAGCACATCCAGAGCATATGTATCCCGGAAACA
TATGTCAGCAATGCAGAGGCCATCGCCTTGGCATCCATTCGCTTAGTGGT
TTCAATTAAGTGCTGTTTGCGGGATAAATCGATCTATTCGGACTTGCCGT
TAAGCGGAAAACTTACTCATATCTACATTCTGGGTCACCCCATGCAATAT
AATCCAGACAATCCGTATTACAATGAAAAGGAGGAGGATTTTCTCAAAGT
GACTTATAGGGCACATAGACCGTTAGCCGTCGTGCGTGCATATTATCAAT
ATTGGCAGACCAAAGATCCAAATCTATTGCAATTGGCCTTCGATGAAGAT
TATTTGCATGCACATCGTCTCTATTGCATAGGCTGGTATGATGCCAAGAT
TTTACCAGCTACAATGCACAATTCATCAGAACAATTCTCGGTCTCTATCA
CCGGAATTGTGCTCAATAAAAAGGTATCGATTTCCGATGCAGAACTTGCC
GTACTGGCTTCCATACCCACGCTTACCACCATTCGATGTTCATTTGTTCA
AATAGAGCAAAGTATCGCGGTAAACTCCAGCACGTTAATGAGATTACAAT
ACGGAAATCGAGTGGATAAATTAAACCGAATTAGCATAATTCGTTTCGTC
AAACCACGATTCTGTGACGCTCGGAATGCATTCCTTTAAATGAATCTGAA
TTTACGGG
UFO12071.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32107-RE | 3956 | CG32107-RE | 508..1498 | 91..1073 | 4605 | 98.2 | Plus |
| CG32107-RD | 3892 | CG32107-RD | 508..1498 | 91..1073 | 4605 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12859798..12860739 | 1020..82 | 4490 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:54:06 has no hits.
UFO12071.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:02 Download gff for
UFO12071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32107-RA | 1..1014 | 82..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:01 Download gff for
UFO12071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32107-RC | 511..1515 | 91..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:01 Download gff for
UFO12071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32107-RD | 508..1512 | 91..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:01 Download gff for
UFO12071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12859726..12860747 | 72..1087 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:01 Download gff for
UFO12071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12852826..12853847 | 72..1087 | 97 | | Minus |
