Clone UFO12072 Report

Search the DGRC for UFO12072

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:120
Well:72
Vector:pUAST-CFLAGHA-BD-PHI
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12072.5prime Sequence

825 bp (570 high quality bases) assembled on 2012-06-29

> UFO12072.5prime
TCTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTT
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGATTAAGGAAATA
TACTTCCAACTCGTCATTGTTTCGCTGGCTGTACTGTTACCAGCGAATAG
TTATCCCCTGGAGCCAAATGCGGAAAATGCATGCGAATTTATCAGGAACG
TTGCGCGATTTCCAGACGATGAGAATGCTTGGTGGGAAAAGAGTAAAAGT
TTAGCCAATTCCATTTTGGAGACCAAAATCAATTATAAAGGATCATACCG
TTCCTGTAACCAATATGTTGCTACCCTACAAAATCTAAAAAATCGTGGAA
ATGAATTAAATGCATCCAGTCCTTGGGCACAAATAATTGAATATCTTAAC
GCATCCTCACAGGAAATATGAAGGTGGTCCGTGTACTGATGAGGAACCCT
ACAGTTATATATATTCAAGTAACATTAAAAACATGAAAAACGATATACGC
GAATTGGGTCAACATGTGAAAGATCAAAACCGAATATCATAATTTTGGTT
GGCACATTATTGATACGAATGTCAATACGATCCATAAAATACATTTATCT
GGTTTTCCTCTATTCCCGAAATATGGAATATTTTAACCACGGTTTTCCCT
TCTCGGCCAAGTGTTACTCTCGCCCCAAATGGCAAGCTTTTCTAAGAACC
ATTTCGTTTGGCCGCGCGGGGCCCCAGGTTAAGTGGTCATAATCCTTAAT
CATAATCCCTAATCATAAATCCACAAACCTAAGCCCTATAGAAGAATCCT
GGGTCCTTGAACTAGTTGCTTGGAA

UFO12072.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 660 CG42763-RA 20..585 86..670 2390 95.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144540..8144981 582..136 1975 98.2 Minus
2L 23513712 2L 8145034..8145088 140..86 260 98.2 Minus
Blast to na_te.dros performed on 2014-11-28 17:54:09 has no hits.

UFO12072.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:03 Download gff for UFO12072.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 1..530 86..628 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:03 Download gff for UFO12072.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..549 86..628 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:03 Download gff for UFO12072.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..549 86..628 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:03 Download gff for UFO12072.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8144502..8144980 137..628 96 <- Minus
2L 8145038..8145088 86..136 100 == Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:03 Download gff for UFO12072.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8144502..8144980 137..628 96 <- Minus
arm_2L 8145038..8145088 86..136 100 == Minus