UFO12072.5prime Sequence
825 bp (570 high quality bases) assembled on 2012-06-29
> UFO12072.5prime
TCTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTT
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGATTAAGGAAATA
TACTTCCAACTCGTCATTGTTTCGCTGGCTGTACTGTTACCAGCGAATAG
TTATCCCCTGGAGCCAAATGCGGAAAATGCATGCGAATTTATCAGGAACG
TTGCGCGATTTCCAGACGATGAGAATGCTTGGTGGGAAAAGAGTAAAAGT
TTAGCCAATTCCATTTTGGAGACCAAAATCAATTATAAAGGATCATACCG
TTCCTGTAACCAATATGTTGCTACCCTACAAAATCTAAAAAATCGTGGAA
ATGAATTAAATGCATCCAGTCCTTGGGCACAAATAATTGAATATCTTAAC
GCATCCTCACAGGAAATATGAAGGTGGTCCGTGTACTGATGAGGAACCCT
ACAGTTATATATATTCAAGTAACATTAAAAACATGAAAAACGATATACGC
GAATTGGGTCAACATGTGAAAGATCAAAACCGAATATCATAATTTTGGTT
GGCACATTATTGATACGAATGTCAATACGATCCATAAAATACATTTATCT
GGTTTTCCTCTATTCCCGAAATATGGAATATTTTAACCACGGTTTTCCCT
TCTCGGCCAAGTGTTACTCTCGCCCCAAATGGCAAGCTTTTCTAAGAACC
ATTTCGTTTGGCCGCGCGGGGCCCCAGGTTAAGTGGTCATAATCCTTAAT
CATAATCCCTAATCATAAATCCACAAACCTAAGCCCTATAGAAGAATCCT
GGGTCCTTGAACTAGTTGCTTGGAA
UFO12072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42763-RA | 660 | CG42763-RA | 20..585 | 86..670 | 2390 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8144540..8144981 | 582..136 | 1975 | 98.2 | Minus |
2L | 23513712 | 2L | 8145034..8145088 | 140..86 | 260 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:54:09 has no hits.
UFO12072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:03 Download gff for
UFO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42763-RA | 1..530 | 86..628 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:03 Download gff for
UFO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42763-RA | 20..549 | 86..628 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:03 Download gff for
UFO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42763-RA | 20..549 | 86..628 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:03 Download gff for
UFO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8144502..8144980 | 137..628 | 96 | <- | Minus |
2L | 8145038..8145088 | 86..136 | 100 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:03 Download gff for
UFO12072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8144502..8144980 | 137..628 | 96 | <- | Minus |
arm_2L | 8145038..8145088 | 86..136 | 100 | == | Minus |