UFO12077.5prime Sequence
1127 bp (1006 high quality bases) assembled on 2012-06-29
> UFO12077.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGAAGAGCCAACCCAT
CCTGATTCTGGCCGTGTGCCTCTTGGCCCTCTCCGCCGTTTCCGCCATGC
CACAGCGTCGGGCGAAGAGTCAACGCCAGGTGGAGTACTCATCCACACCC
TATCCGGCTGCTGGCTTCCGCCCCAGGGTTCCCTTTAATCTGCCCGGTGA
AGTTCAACCCAAGATCGAGACGGAACCACTGACCACCACCAGTACCACGT
CTGCCAGCGAAGTGGAAACCCTGGAGAATACCGAGCCACTTAGCACCACC
GAGCAGCAGCAGCCGGAAGCGGGAACGGTAGCGGATTTGGAATTGTCCAT
CCGCACGCCTGCCAATACCTACGGAGCCCCTGAAGAGCAGGATCCCCTCG
TGCCGGACACCGTAGTGGTGGTGGCCCAGGAGCCAGCCCGCGACTTTCAG
CCCCCCTCCCTGGATGCCGTCGAGGACTTTGCCGCCGATGTCACTGTTGC
TGCTGATGGCGAGCAGCCTGTTGCTGATGTCCCTGCCCTGGGCCAAGCGG
AGTCGGAGGACGATGAGCCCGAGGCGGCGGTCAAGGCTGTCACCCCGGCT
GGAGCCTATGGACCACCCGCCGCCACCTACGGTGTGCCTGAGCTGAGCGA
GACCGAGAACGAGTTGGATCTGGAGGAGTCGCAAGTTGAGCTGGTTGAAG
AGGAGGCGGCGGCGGAGGAGGCGCTGACCAACGAGCTCTCTAGTGGTCGC
CTGATCCTCCTGCCCTTGGGCGCCAGGGGAACACAGTTTGGTCGCCTCAT
CCCTTGCCGTGGAGCAACCACGCCAGCGCCTGAGGAGCGAACGACTCAGC
GGATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GTCATAATCATAATCATAATCATAATCATATCACACTAGCTAGAGATCTG
TCATGACTGTGCTTGATCCCACATAAAAAACGCCCGCGCACCGACGTTCT
GAACAATTCGAATGGAGTTCTGAGGTCATAACTGATCTATCAAGGATTCA
GCGAGCTCGATTCCATACCGCCCGGCC
UFO12077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14564-RA | 890 | CG14564-RA | 1..822 | 84..905 | 4065 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21757155..21757971 | 82..899 | 4040 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-28 17:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6837 | 586..530 | 114 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6783 | 586..530 | 112 | 70 | Minus |
UFO12077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:10 Download gff for
UFO12077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..825 | 84..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:24 Download gff for
UFO12077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..831 | 84..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:24 Download gff for
UFO12077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..831 | 84..914 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:24 Download gff for
UFO12077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21757149..21757987 | 76..914 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:24 Download gff for
UFO12077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21750249..21751087 | 76..914 | 99 | == | Plus |
