Clone UFO12082 Report

Search the DGRC for UFO12082

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:120
Well:82
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptl(2)tid-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12082.5prime Sequence

826 bp (821 high quality bases) assembled on 2012-06-29

> UFO12082.5prime
CAGTCGACATGATGATTTCGTGTAAAAAATTATTCGTGTTCCGGCAGCTG
CCGGCGGTGCGCCGTTGCCTAGCGGCAGCCGCGTTCTCCACGCCACGCGC
GACCTCCTACCGAATCCTCTCCAGCGCCGGGAGCGGAAGTACCCGGGCAG
ACGCACCCCAAGTGCGCCGCCTGCACACCACGCGCGACCTCCTGGCCAAG
GACTACTACGCCACGCTGGGCGTTGCCAAGAACGCCAACGGCAAGGACAT
CAAGAAAGCCTACTACCAGCTGGCCAAGAAGTACCATCCGGACACGAACA
AGGAGGATCCGGATGCGGGCCGCAAGTTCCAGGAGGTCTCCGAGGCCTAC
GAAGTGCTCAGCGACGAGCAGAAGCGCCGTGAGTACGACACCTATGGCCA
GACGGCGGAAAACATTGGTCGCCAGGGCGGCGGATTCCCTGGCGGAGGAG
CCGGTGGCTTTGGCCCCGAGGGTTTCTCGCAGAGCTGGCAGTTCCGCTCG
AGCATCGACCCCGAGGAGCTCTTCCGCAAGATCTTCGGCGAGGGCAACTT
TCGAACTAACTCGTTCGACGACTTCGCCGACTCCAAGTTCGGATTCGGCC
AGGCCCAGGAGATGGTCATGGACCTGACCTTTGCCCAGGCGGCGCGCGGC
GTTAAAAAGGATGTCAACGTCAACGTGGTGGACCAGTGCCCCAAGTGCGC
CGGCACCCAAGTGCGAGCCGGGCACCAAGCCCAGGTCGCTGTCAGTACTG
CAACGGCACCGGCTTCGAAACGGTGTCCCCTGGGCCCTTCGTAATGCGCT
CTATTTGCCGCTACTGCCAGGGCACG

UFO12082.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)tid-RD 1786 CG5504-RD 74..889 9..826 3965 99.1 Plus
l(2)tid-RE 1505 CG5504-RE 74..889 9..826 3965 99.1 Plus
l(2)tid-RC 1959 CG5504-RC 242..1057 9..826 3965 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23707154..23707969 9..826 3915 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 17:54:32 has no hits.

UFO12082.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:07 Download gff for UFO12082.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)tid-RC 293..1108 9..826 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:17 Download gff for UFO12082.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)tid-RB 74..889 9..826 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:17 Download gff for UFO12082.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)tid-RC 242..1057 9..826 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:17 Download gff for UFO12082.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23707154..23707969 9..826 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:17 Download gff for UFO12082.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19594677..19595492 9..826 99   Plus