UFO12082.5prime Sequence
826 bp (821 high quality bases) assembled on 2012-06-29
> UFO12082.5prime
CAGTCGACATGATGATTTCGTGTAAAAAATTATTCGTGTTCCGGCAGCTG
CCGGCGGTGCGCCGTTGCCTAGCGGCAGCCGCGTTCTCCACGCCACGCGC
GACCTCCTACCGAATCCTCTCCAGCGCCGGGAGCGGAAGTACCCGGGCAG
ACGCACCCCAAGTGCGCCGCCTGCACACCACGCGCGACCTCCTGGCCAAG
GACTACTACGCCACGCTGGGCGTTGCCAAGAACGCCAACGGCAAGGACAT
CAAGAAAGCCTACTACCAGCTGGCCAAGAAGTACCATCCGGACACGAACA
AGGAGGATCCGGATGCGGGCCGCAAGTTCCAGGAGGTCTCCGAGGCCTAC
GAAGTGCTCAGCGACGAGCAGAAGCGCCGTGAGTACGACACCTATGGCCA
GACGGCGGAAAACATTGGTCGCCAGGGCGGCGGATTCCCTGGCGGAGGAG
CCGGTGGCTTTGGCCCCGAGGGTTTCTCGCAGAGCTGGCAGTTCCGCTCG
AGCATCGACCCCGAGGAGCTCTTCCGCAAGATCTTCGGCGAGGGCAACTT
TCGAACTAACTCGTTCGACGACTTCGCCGACTCCAAGTTCGGATTCGGCC
AGGCCCAGGAGATGGTCATGGACCTGACCTTTGCCCAGGCGGCGCGCGGC
GTTAAAAAGGATGTCAACGTCAACGTGGTGGACCAGTGCCCCAAGTGCGC
CGGCACCCAAGTGCGAGCCGGGCACCAAGCCCAGGTCGCTGTCAGTACTG
CAACGGCACCGGCTTCGAAACGGTGTCCCCTGGGCCCTTCGTAATGCGCT
CTATTTGCCGCTACTGCCAGGGCACG
UFO12082.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:54:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)tid-RD | 1786 | CG5504-RD | 74..889 | 9..826 | 3965 | 99.1 | Plus |
l(2)tid-RE | 1505 | CG5504-RE | 74..889 | 9..826 | 3965 | 99.1 | Plus |
l(2)tid-RC | 1959 | CG5504-RC | 242..1057 | 9..826 | 3965 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:54:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23707154..23707969 | 9..826 | 3915 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:54:32 has no hits.
UFO12082.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:07 Download gff for
UFO12082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)tid-RC | 293..1108 | 9..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:17 Download gff for
UFO12082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)tid-RB | 74..889 | 9..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:17 Download gff for
UFO12082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)tid-RC | 242..1057 | 9..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:17 Download gff for
UFO12082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23707154..23707969 | 9..826 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:17 Download gff for
UFO12082.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19594677..19595492 | 9..826 | 99 | | Plus |