UFO12090.5prime Sequence
1102 bp (1007 high quality bases) assembled on 2012-06-29
> UFO12090.5prime
CTGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTC
GTATAGCATACATTATACGAAGTTATCAGTCGACATGATTTCCGGACCCA
GATTCTCTGCCCTACTAATCGTGGCCCTGACCCTCGCTCTGGTGGCCCAA
ACTTGGGCCGACGAGTTCGATCTGGACTACTCCAACGAGTACGACGATGT
GCGACCGCATTTGGTCTATCCCGACGATCCAAGGCTGGACAAGCGGATCG
GCGATGCGGCGCGGGAGTTTGGACAAAATATAACCCAAGCCTGGAACGCG
ATGGTGGACTCGTTTAAGAACTACTTTGAGGAACTCAAGAACCTTTTCTC
CGACACCACGGATCTCGATTCACCCAATGAAGTATTTTCTAACCGCGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGAGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTACACGCCACATCTTGCGATATATGTGTAGAAACTGCCGGA
ATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTCAGTTTGCTCATGG
AAACGGTGTAACAGGGTGACACTATCCATATCACCAGCTCACCGTCTTTC
ATTGCATACGAAGTCGGAGGACATTCATCAGGCGGGCAGAATGCATAGCG
AT
UFO12090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32551-RB | 393 | CG32551-RB | 29..340 | 85..396 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18438896..18439207 | 85..396 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:55:11 has no hits.
UFO12090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:15 Download gff for
UFO12090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32551-RB | 29..344 | 85..400 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:41 Download gff for
UFO12090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32551-RB | 29..344 | 85..400 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:38 Download gff for
UFO12090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32551-RB | 29..344 | 85..400 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:38 Download gff for
UFO12090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18438896..18439211 | 85..400 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:41 Download gff for
UFO12090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18332929..18333244 | 85..400 | 99 | == | Plus |
