Clone UFO12091 Report

Search the DGRC for UFO12091

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:120
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG5509-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12091.5prime Sequence

450 bp (356 high quality bases) assembled on 2012-06-29

> UFO12091.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGTCCCGATACTCCATGAAAG
GCATCAATTTCGATGTTAAACGCGATATACAAAAGGTGGATGCTCGCACC
TACGGATTCCTGAAGACCAAGGGATCAGATACGCCGATGCCCACGGCTGC
GAAGAGAATTAATCAATCGACGTTGATCGAAAGATTGAAATCCATAACAT
TGGCTGAAGTGGTGGACGAGGAAGATCAGTCGTCTACGGGTTCAGTGGAA
ATCGGGTAGCATGTCCTTCGAAATGAAACGGAAGCTATTTTGACGCAGCC
CGAGTTTCACCATCACCCCGAGGTCAGAAAACTGAGTGACCCTCACGCCA
TGCCGGCCTTGATGAAGGGGAATAAACTTTTAGTTCCGTAACGAATAACC

UFO12091.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5509-RA 733 CG5509-RA 73..391 79..405 1435 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12452536..12452842 79..391 1265 98.1 Plus
Blast to na_te.dros performed on 2014-11-28 17:55:14 has no hits.

UFO12091.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-29 09:36:16 Download gff for UFO12091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 66..426 71..450 93   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:44 Download gff for UFO12091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 66..426 71..450 93   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:40 Download gff for UFO12091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 66..426 71..450 93   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:40 Download gff for UFO12091.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12452524..12452889 67..450 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:44 Download gff for UFO12091.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8278246..8278611 67..450 93   Plus