UFO12106.5prime Sequence
885 bp (756 high quality bases) assembled on 2012-07-26
> UFO12106.5prime
ATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTAT
AGCATACATTATACGAAGTTATCAGTCGACATGTCTTACCAAACCGGAGC
GGTTTCTACACTCGTCCTCGTCCTGTTGGCGTTATCCTTTTCGGAGGCAA
GTTTACGCCGTCGGGCCTTCACTTCAGAAAAATCCGAAACCGCGAATAAA
TTTAGCTCCCGAATCGTCGGAGGAGAAGAATCCGATGTCCTGGCGGCACC
CTATCTAGTCTCGCTCCAAAACGCCTATGGTAACCACTTTTGTGCCGGCT
CCATTATCCACGATCAGTGGGTCATCACCGCGGCTAGTTGCCTGGCTGGA
TTGCGAAAGAACAACGTGCAGGTGGTGACCACCACCTATAATCACTGGGG
ATCGGAGGGCTGGATATACTCCGTGGAGGATATCGTCATGCACTGCAACT
TCGACAGCCCCATGTACCATAATGACATTGCCCTGATCAAGACGCATGCA
CTATTCGATTACGATGATGTCACTCAGAATATCACAATCGCTCCGTTGGA
GGATTTGACCGATGGTGAAACGCTAACCATGTACGGATACGGCAGCACGG
AGATCGGAGGAGATTTCTCATGGCAGCTGCAGCAGTTGGATGTAACCTAT
GTCGCGCCGGAAAAGTGCAATGCCACGTACGGCGGTACTCCAGATCTGGA
TGTGGGTCACCTTTGTGCCGTGGGAAAGGGGGAGCCGAGCATGTCATGAA
AATACCGAGACCCATCGTGACGTCTGTCGCTGGTGGGCGTGTACTGGGGC
GTTCTGCGCTATGATTTCCGATGTTTTTGCCCGCATAGCTTACTACGCTG
GATTAATCACGATAACGAGTGTCTATTCCGCAAGC
UFO12106.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31267-RA | 921 | CG31267-RA | 24..819 | 81..855 | 3455 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17134585..17135064 | 280..757 | 2270 | 99.2 | Plus |
| 3R | 32079331 | 3R | 17134220..17134419 | 81..280 | 1000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:59:52 has no hits.
UFO12106.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:26 Download gff for
UFO12106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31267-RA | 15..824 | 72..859 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:38 Download gff for
UFO12106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31267-RA | 15..824 | 72..859 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:10 Download gff for
UFO12106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31267-RA | 15..824 | 72..859 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:10 Download gff for
UFO12106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17134207..17134419 | 68..280 | 96 | -> | Plus |
| 3R | 17134586..17135186 | 281..859 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:38 Download gff for
UFO12106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12959929..12960141 | 68..280 | 96 | -> | Plus |
| arm_3R | 12960308..12960908 | 281..859 | 96 | | Plus |
