UFO12107.5prime Sequence
442 bp (370 high quality bases) assembled on 2012-07-26
> UFO12107.5prime
GGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCA
TACATTATACGAAGTTATCAGTCGACATGCTGAAGACATTGGTTCAACTT
TTCCTTGTTGTCGCCGGTTTTGCACCAGGATTCGGCTACGACAAGTACAC
CACACACATACAAAATGGAAACCCGTACAACTTGACCGTTGACATGACTC
CCTTCATTAAGATCAACGAAAGCTACTATGTTTTTGGACAGACTAAGGTC
AATTGGTATGTCGCCTACGAGAACTGCCGCAGGCTTCAATCCGAACTGGT
GACCTTCGAAAACAGCCGAAAAGTTTGACGCCATTGCCCGCGTTTCTTTG
AAATGCCCGAAGAAGATCCGCTTCCGAAGCAACTGGGACCCTCCCGGGCA
ATGGAATTTGGGGCCAAAACCCGGCACCCCCACTAACGGGGT
UFO12107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Da-RB | 638 | CG33532-RB | 2..335 | 77..429 | 1290 | 94.1 | Plus |
| lectin-37Da-RA | 651 | CG33532-RA | 2..335 | 77..429 | 1290 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19418470..19418640 | 167..338 | 795 | 98.8 | Plus |
| 2L | 23513712 | 2L | 19418318..19418409 | 77..168 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:59:55 has no hits.
UFO12107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:27 Download gff for
UFO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 2..283 | 77..363 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:39 Download gff for
UFO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 2..283 | 77..363 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:12 Download gff for
UFO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 2..283 | 77..363 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:12 Download gff for
UFO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19418311..19418408 | 70..167 | 95 | -> | Plus |
| 2L | 19418471..19418661 | 168..363 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:39 Download gff for
UFO12107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19418311..19418408 | 70..167 | 95 | -> | Plus |
| arm_2L | 19418471..19418661 | 168..363 | 96 | | Plus |
