UFO12109.5prime Sequence
764 bp (640 high quality bases) assembled on 2012-07-26
> UFO12109.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGTGGTTGGCTGGGAATCTGT
TCAAAGGATCCGTAGCAATCAGATTCGGTCGCTTGCTGCATCTCAAGCGC
AAGGAGGTTTATATGGAATGCTTCCGCATCCTGGGCGTTCACGAATCAGC
TGATCAGAATACGGTACGCCACGCCTACTTGGATCTGGTGAAACGGGTGC
ATCCCGATTCGGGAACGGAGGAGGCCAGTGCCGAACGCTTCCAGCAGGTG
GACGAGGCTTTCCGTGTGCTGCAGGAAAAGTTCGCCAAGGGAAGGCGAAA
CATTCAGGAGGACGAGGAGGGGGCCATGGAGTTTGACATCAAGCATACGG
CGCCGCAGCACCGGCAATATCTGTCCAACGAGGGCATCGGAGTGGGAACT
CCATTTCAGCGGCAAAAGCAGTACCAGCAGGTGCGCGCCATGAAGGCTCA
GGAACGCGTCCTGGAGCACCGCATCGACAAGGCGGCTGCCGGAGAGAAAA
ACACTAATGTCCAAGGGCGGCAGCCACTTTCGGAAACATGCTATTAAAAC
CAAGTACGGTATTGATCGTGGGGCTCGAGGGATCTTCATTCCGACGGCCA
TGTCCAAGGGGTGGACTTTAACAATCTAAAGCGGGTTCTGGAAAGGCCCT
GGTCCTCGGCTTCAGTCCCAAAATCCCTTATCTGGAACTTTCCAACCCAC
GATTTGAACAAGAT
UFO12109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43322-RA | 1272 | CG43322-RA | 101..774 | 79..764 | 2950 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7013652..7014239 | 165..764 | 2245 | 95.5 | Plus |
2L | 23513712 | 2L | 7013496..7013583 | 79..166 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:00:01 has no hits.
UFO12109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:29 Download gff for
UFO12109.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13776-RA | 94..774 | 72..764 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:45 Download gff for
UFO12109.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43322-RA | 94..774 | 72..764 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:15 Download gff for
UFO12109.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43322-RA | 94..774 | 72..764 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:15 Download gff for
UFO12109.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7013489..7013582 | 72..165 | 96 | -> | Plus |
2L | 7013653..7014239 | 166..764 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:45 Download gff for
UFO12109.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7013489..7013582 | 72..165 | 96 | -> | Plus |
arm_2L | 7013653..7014239 | 166..764 | 96 | | Plus |