Clone UFO12109 Report

Search the DGRC for UFO12109

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:121
Well:9
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13776-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12109.5prime Sequence

764 bp (640 high quality bases) assembled on 2012-07-26

> UFO12109.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGTGGTTGGCTGGGAATCTGT
TCAAAGGATCCGTAGCAATCAGATTCGGTCGCTTGCTGCATCTCAAGCGC
AAGGAGGTTTATATGGAATGCTTCCGCATCCTGGGCGTTCACGAATCAGC
TGATCAGAATACGGTACGCCACGCCTACTTGGATCTGGTGAAACGGGTGC
ATCCCGATTCGGGAACGGAGGAGGCCAGTGCCGAACGCTTCCAGCAGGTG
GACGAGGCTTTCCGTGTGCTGCAGGAAAAGTTCGCCAAGGGAAGGCGAAA
CATTCAGGAGGACGAGGAGGGGGCCATGGAGTTTGACATCAAGCATACGG
CGCCGCAGCACCGGCAATATCTGTCCAACGAGGGCATCGGAGTGGGAACT
CCATTTCAGCGGCAAAAGCAGTACCAGCAGGTGCGCGCCATGAAGGCTCA
GGAACGCGTCCTGGAGCACCGCATCGACAAGGCGGCTGCCGGAGAGAAAA
ACACTAATGTCCAAGGGCGGCAGCCACTTTCGGAAACATGCTATTAAAAC
CAAGTACGGTATTGATCGTGGGGCTCGAGGGATCTTCATTCCGACGGCCA
TGTCCAAGGGGTGGACTTTAACAATCTAAAGCGGGTTCTGGAAAGGCCCT
GGTCCTCGGCTTCAGTCCCAAAATCCCTTATCTGGAACTTTCCAACCCAC
GATTTGAACAAGAT

UFO12109.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG43322-RA 1272 CG43322-RA 101..774 79..764 2950 96.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7013652..7014239 165..764 2245 95.5 Plus
2L 23513712 2L 7013496..7013583 79..166 440 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:00:01 has no hits.

UFO12109.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:29 Download gff for UFO12109.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13776-RA 94..774 72..764 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:45 Download gff for UFO12109.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43322-RA 94..774 72..764 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:15 Download gff for UFO12109.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43322-RA 94..774 72..764 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:15 Download gff for UFO12109.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7013489..7013582 72..165 96 -> Plus
2L 7013653..7014239 166..764 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:45 Download gff for UFO12109.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7013489..7013582 72..165 96 -> Plus
arm_2L 7013653..7014239 166..764 96   Plus