UFO12111.5prime Sequence
1085 bp (709 high quality bases) assembled on 2012-07-26
> UFO12111.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAATCCACATGCTGCGACCACTGTGCA
TTATTCAGATCCTTTTGCTCGCTTTCCTGGCGAACGAGTCGGAATCCTCG
AACACTCATCTCCATCGCTATATGCTGGACACCTATAAGCCGCAGCACAA
TCAAAAAACCCAAATGAACTACAAACGACGCCGTACTGTAAGGAGCGATC
ACGAAATGGCTATCGATCCCAATAATCCAAATAATCCCAATAATCCAAAT
AATTCCGATAGTCCCGATAATCCCAATAATCTCAATAATCCAAATAATCC
GAATAATGACACAGTACAGTATGGACATTCCAAGGAGCCTGTAGTTACCT
TGACCAATTCGGACAAGAAGGTGCCGCTGCACGAGCTGATGGTGAGACTC
TATCAGCAAAACAAATATATCTGCATGGGCACGGTGATATCCGAGATGCT
AGTGATTACCACTAGCACTTGTTTTAATTTGGCCAGCAGTGAAGTGGTCA
CGATGAAGATGTACGATGACGAAGTCCTCGAAGGGAAAAGAGTCGCTCTC
AACCAGACCTACCTTAAAGGAGCGGATCCCATGCTGGTTGCTATTCAACT
AACCAAGTCCCCAAAGAATTCCAAAGTGACTGGTGACACCGTGAAGCTGT
GCGATTCGGAGCTAGAAATATACGAGCCCATCGAGCTGCCACTGTGGATC
ATGAGTCGCCACAGTATTCACTCGCAGACAACGTACATCATACCGATGCA
AGCGTGCCGACTCCGCATGAGGGATCCCGAATCGATGGTCGCCACCGACA
CTATGATCTGCGTGAAGATCATGAAGTATACGGCCCAGTGCCACTTGGCC
ATGGGTAATCCCCTCGTTCACGACGAACGTCATCTGCAGCATCATGTGGC
TGGTCACACTGTCCCGCCTACACGGTCGTGATCTATACATCAAATATACG
ATGCTCTCGCTGCTCGATATGGGGCATGTAATCATAAAACTCCGCATAGA
ACATGCATTTGCCAGCTTTCTGATCGATTCGGTGC
UFO12111.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9997-RB | 1325 | CG9997-RB | 1..978 | 82..1051 | 4445 | 97.5 | Plus |
CG9997-RA | 1030 | CG9997-RA | 1..978 | 82..1051 | 4445 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28756048..28756979 | 1010..82 | 4265 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:59:48 has no hits.
UFO12111.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:25 Download gff for
UFO12111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..954 | 82..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:35 Download gff for
UFO12111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..954 | 82..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:08 Download gff for
UFO12111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..954 | 82..1031 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:08 Download gff for
UFO12111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28756026..28756996 | 66..1031 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:35 Download gff for
UFO12111.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24581748..24582718 | 66..1031 | 97 | <- | Minus |