UFO12117.5prime Sequence
841 bp (732 high quality bases) assembled on 2012-07-26
> UFO12117.5prime
TAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATA
GCATACATTATACGAAGTTATCAGTCGACATGCGGTTCATCGGTTGTGCT
TTCTTGGGCTTCATGTGCCTGGTGGCTTTTCCCTCTGCAACGCCGGCTAT
TTTGGCTCCGATCCGGCCATATGGTCAGAATGGAACCCTCGCTCAGCAGA
ACAACTTTGCCTTGGAGCTGAAGTCGGTGATTCGACAGATACCGGTGGAC
AACATCGAGAAGCTGGTTCAGACCTACCTCCTCAACGACATCGAGTTCCA
AGGTGTGATCAGAGCCATTAACTCCCTACCCGCCTATCGATTCTACCGCC
AGTTGATCAACCAACCCGAAGTGCGCCAACTGCAGCAGTGGATCACGCAG
CAATTGATCCTGTCCGGCGGTGGACCCAAAATCTTTGATTATCTAGAACT
GGAGATCAAGATCTTGAACAAGTATCCCTATTGGTCGCAGATCGTACATG
GAATCCAGGGATTCCAAGCGGAGTTCGTGCAGATCTACCCAGTGCAACTG
ATCCGATCCTTTCTGGAACCCAGTGCCACCCAAACAAGTCCTCAACTGTC
GGAACTCTGGCGTCGTCTGGTGGCCTTGCGTCCAGTTTACGAAAGAGTTT
TGGCCACTCACCCGGCAAGGCCATCACTGCTGAACTCCAGAGACTGGGCG
TGGATGTGGGGTGGTGTAACGCCCTTATCCGTATCAGTTCGTGGAGCACG
TCACCTTTCGAGCTACGAATACCAGATACTGTACGCAGCTTCTAGAACAT
CGTGGCCGCGGCAAGGTAATGGCTATCTAATCGTATCTAAT
UFO12117.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13905-RB | 913 | CG13905-RB | 1..705 | 80..777 | 3285 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 902898..903551 | 80..732 | 3110 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:00:19 has no hits.
UFO12117.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:33 Download gff for
UFO12117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13905-RB | 1..717 | 80..788 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:57 Download gff for
UFO12117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13905-RB | 1..717 | 80..788 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:26 Download gff for
UFO12117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13905-RB | 1..717 | 80..788 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:26 Download gff for
UFO12117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 902890..903614 | 66..788 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:57 Download gff for
UFO12117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 902890..903614 | 66..788 | 97 | | Plus |
