UFO12120.5prime Sequence
1173 bp (1063 high quality bases) assembled on 2012-07-26
> UFO12120.5prime
AATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTA
TAGCATACATTATACGAAGTTATCAGTCGACATGTCATTTAAACTATCTT
TGCATTGTCTGCTGATCCTGGCAGGATATCTCACTTCAATTGAAGCCGAA
GTTTTCCCGCAGTGCGCAAATGCTCCATTGGATACCTTTGTCATGGCCAT
CGAAGATTGCGCTTCATACATCTATTGCAATGGAGAAGACTCCTTCCGAG
ACAGCTGCCCCGAGTCCACCTACTTTGACGATCGAACCCAAGAGTGTGCC
TTTGATGATGAGGGTGTGTGTCTAAGGAACTCAGACTCAGTCCAGACTGA
GGAGCAGCCCGATAAGCAAACTACTGGTGAGGAGCAGAGCGGGATCGAAG
AAACCACTCCCGTTCCAACACCGCCTTCTGATTACGCCTCTACAGGATCT
GCGGACTCTTCTACTTTCCAAGCTGATTCTACAACAACCCCTACAGAATC
AATTCCTTCAGTGACTGAGCCACCGACTACATCTGCTACGCCATCCTCCC
CATCTGCAAAGCCTTCCTCTCCAGCTCAGGAAAGGCCGCACTGCGACATT
TCCGGAGATGGTGACCATCCTCATCCCCAGCGGTGCGAGTACTACTACAG
GTGCCTCAGCGGCTATCTGACCATTGTGAGATGTCCTTACAAGTATGGCT
GGGACTTTCCTACAAAGCAATGCAAGCCTAGCAGCGAGGCTCAGTGCTTT
AGTTATAGCTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTC
ATTACTGATCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCCGCCCTGCCACCTCATCGCAGTACTGTGTATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGCATGATGAACCTGAATCGCAGCGCATCA
GAACTTGTCGCCTTGCCGTATAAATATTGGCCATGGTGAAACGGGCCAAG
ATGCATTGGCCAGTTATCAAACT
UFO12120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-RA | 849 | CG33263-RA | 1..681 | 82..762 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13423488..13424169 | 762..81 | 3410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:00:28 has no hits.
UFO12120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:36 Download gff for
UFO12120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 82..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:04 Download gff for
UFO12120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 82..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:32 Download gff for
UFO12120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 82..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:32 Download gff for
UFO12120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13423481..13424176 | 72..771 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:04 Download gff for
UFO12120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13416581..13417276 | 72..771 | 98 | | Minus |
