UFO12121.5prime Sequence
613 bp (507 high quality bases) assembled on 2012-07-26
> UFO12121.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGGCTTCGTTCCGGTTTCAAT
TGTTGCAGCTCCTAGTGGTTCTCAGCCAAGGTTGGGCCAACCTCAACGTG
CAGAACAACTATAGAAACATGATGGTCCGACTGGCCACTAACAAGGCAGC
GCTCGCCGGTATTCAAGTCCTCCGCGAGGGACGCGTGGAGGTGAGCTTTG
ACTTTGGCGCCTCATGGGGTACGATCTGCAGCACTTCGTGGAGCATGCGG
GAGGCAAATGTGGTGTGCCGACAGCTAGGATTGGGCTACGCTTCCAAGGC
AAGCCAGGGAACGGAGCACGGGGATAGCCGGAAGTATCCCTGGGGCATGG
TGGGCACTCTGTGCAGGGGAACCGAGCGTCGCCTAGCCGACTGCATCCGG
GAGTCCCACTACCCGAACCTCTGCAATGCCAAGAAACCATAATGTCAGCA
TTGCGGCCTGTGTTAGCCATTCGGCTGACCTGGAGATCGGACTGGTGGAC
ATCGAGAGAACCGCCCCGCCTGGAGGCCGTGGCCCATGTCGCCGCTCACA
TGCGCCATGAAGA
UFO12121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lox-RA | 1435 | CG11335-RA | 149..676 | 79..609 | 2565 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31459194..31459721 | 609..79 | 2490 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:00:31 has no hits.
UFO12121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:36 Download gff for
UFO12121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox-RA | 147..680 | 75..612 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:06 Download gff for
UFO12121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox-RA | 147..680 | 75..612 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:34 Download gff for
UFO12121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lox-RA | 147..680 | 75..612 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:34 Download gff for
UFO12121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31459190..31459721 | 79..612 | 99 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:06 Download gff for
UFO12121.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27284912..27285443 | 79..612 | 99 | == | Minus |