UFO12127.5prime Sequence
755 bp (753 high quality bases) assembled on 2012-07-26
> UFO12127.5prime
CAGTCGACATGGACTATACACGTGAAATTTTGACCTTCCAGTTCGGAACG
TACGCGAATTACGTGGGCACACACTTCTGGAACCAGCAGGAGGCCAACTT
TAGGTACGGAGACGAAAGCGAACAGGTGGCCGAGGAGCAGCTGCCCAACA
ATGATATTTTGTACCGTGAAGGGCGCAACGACCTCAATCGTACCACCTAC
ACGCCCCGCCTGCTGTCCGTGGATTTGTCCGGGACCCTGGGACATCTGCC
GGTGACCGGCGAGCTGTACGGCAATTTTGTGCAGCGTGATGAGGAGTTGC
TGCCCCTGAGCACCGGAGAGGAATTGGAACAGGTTCGCAAGCGGGCAGAG
GAGAGCGGCGTATGCTCACCGGAGCAGCTGGAAGTGCAGGAGCAGTCGAA
GGCCTCCATTTCCGAATATCAGCGGGATCTGCTCAAGAATGCTGTGGTGC
CCGAGAAGAACTATCAGCTGGCAGCGACGGCAAACAGTTGGGTGGACTTC
CTTTACGCCAGGTATCACCCGAGAACCTTGAATGTCTTGCCGGGGCTGAT
CCGAGATCCGACTGCCCAAGCCCTGGGTACCTACTCTGCCGGAACAGAAA
TGTGGCAGGAAGTCTCCTTCAACGAGGAGTTCTGCGATCGTATCCGTTTG
TATGTAGAGGAGTGCGATGGCCTGCAGGGCTTCCACGTGCTGTTCGACAT
TGACCATGGCTTTCCGCGGACTGGCTGGGAAGTGCCTGGAGCACCTCACT
ATGAG
UFO12127.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mst-RB | 2443 | CG1424-RB | 36..774 | 9..748 | 3645 | 99.6 | Plus |
| mst-RA | 1893 | CG1424-RA | 36..774 | 9..748 | 3645 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21389145..21389805 | 87..748 | 3230 | 99.5 | Plus |
| X | 23542271 | X | 21389012..21389093 | 9..90 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:00:41 has no hits.
UFO12127.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:39 Download gff for
UFO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 1..752 | 5..755 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:13 Download gff for
UFO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 36..782 | 9..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:40 Download gff for
UFO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 36..782 | 9..755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:40 Download gff for
UFO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21389012..21389092 | 9..89 | 100 | -> | Plus |
| X | 21389148..21389813 | 90..755 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:13 Download gff for
UFO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21260039..21260119 | 9..89 | 100 | -> | Plus |
| arm_X | 21260175..21260840 | 90..755 | 99 | | Plus |
