UFO12131.5prime Sequence
1164 bp (1055 high quality bases) assembled on 2012-07-26
> UFO12131.5prime
GGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGC
ATACATTATACGAAGTTATCAGTCGACATGTCGATTCGGTTGGTAGCACT
CCTGGCATTGTTCGCCGCCTTGGCGCATGGCAAACCCGGATACGGTCCCG
GAGAGCAGGACTGGGGCTACGTAGATGTGCGTCCCGGTGCCCACATGTTC
TACTGGCTGTACTACACCACCGCCAATGTTTCGAGCTATACCGAAAGACC
ATTAGCCATTTGGCTCCAAGGAGGTCCCGGTGCCTCTTCGACGGGGTATG
GAAACTTTGAAGAACTTGGGCCCGTCGATTTGTACGGAGATTGGCGCAGC
TGGACCTGGGTGAAGGACATGAATGTCCTCTTTATTGACAACCCCGTAGG
CAGTGGTTTTAGCTACGTGGACAACACGGCCTTTTACACGGCCACCAATA
AGGAGATCGCTCTAGATTTGGTTGAGCTGATGAAGGGATTCTATACCCTG
CATCCAGAGTTCGAGGAGGTGCCGCTGCATATATTCTGCGAGAGTTACGG
TGGAAAGATGGCGCCGGAGTTTGCACTCGAACTGTACTACGCCAAGAAGC
GTGGTGAGGTCAAGAGCAACCTTACCTCGGTGGCTTTGGGGGATCCATGG
ACCTCGCCCATCGACTCCGTGCTCGCATGGGGACCTTTTCTCAGAGAAAT
GGGAATCGTGGACCACGCGGGATACAATGCCATTCAAGAGGCAGCGAACT
TCACGGCTCAGTTGGTGGAGGAGGAGCGATGGATTCACGCCACCTATCAG
TGGGGCAACACCCAGTGGGAGGTGATGAAAGCCTCCAAGGGTGTGGACTT
CTACAACGTGCTGAAGGAGACAAAGGGTGGTCTCTACCAGAGATCAAAGG
CCTTGACCTCCGAAGAACGTCTGTATCGCACCATGGTGAAATACGATATT
GATGAGATCGACCCAGTTACTGGAGGATCTGATGCGGGGCCCGGTGGCCG
GAAACCCTGGGTATACCTTCGAATGTCATCTGGGGATCCGCAGGTGGACC
ACTTTTGACATCCCACAGAACGGACCTCATGAGCCAGTCCATCCACATTT
GTGACGAATGCCTGGAGAGAAGACTCCCTCTGAGGTCCGCGTAATTCCGG
TGGCCGTGAATGAT
UFO12131.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32483-RA | 1382 | CG32483-RA | 1..1078 | 78..1155 | 4935 | 97.9 | Plus |
| CG3344-RA | 1480 | CG3344-RA | 175..709 | 147..681 | 890 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:00:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 689174..689960 | 915..129 | 3920 | 99.9 | Minus |
| 3L | 28110227 | 3L | 686821..687355 | 681..147 | 890 | 77.8 | Minus |
| 3L | 28110227 | 3L | 688953..689122 | 1082..914 | 520 | 93.6 | Minus |
| 3L | 28110227 | 3L | 690029..690081 | 130..78 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:00:53 has no hits.
UFO12131.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:41 Download gff for
UFO12131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32483-RA | 1..1049 | 78..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:21 Download gff for
UFO12131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32483-RA | 1..1049 | 78..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:47 Download gff for
UFO12131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32483-RA | 1..1049 | 78..1127 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:47 Download gff for
UFO12131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 688933..689120 | 916..1102 | 93 | <- | Minus |
| 3L | 689174..689959 | 130..915 | 99 | <- | Minus |
| 3L | 690030..690093 | 66..129 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:21 Download gff for
UFO12131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 688933..689120 | 916..1102 | 93 | <- | Minus |
| arm_3L | 689174..689959 | 130..915 | 99 | <- | Minus |
| arm_3L | 690030..690093 | 66..129 | 93 | | Minus |
