UFO12137.5prime Sequence
1089 bp (918 high quality bases) assembled on 2012-07-26
> UFO12137.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGCTGTTCAAAATATC
GTGTCTCCTCATTCTTTTGGTCTTCTGTCTGCAGCAGAGTTATTCGATCA
AACGCAGATGCCTTCAGCCACTGGATGTGGGCAAAGGCAAGGCCTATCTG
CGCAATTGGTTCTACAACTCCACATCGCAGAGGTGCCAAAGGTTCATCTT
CTATGGAGGCGCGAGCAATGGCAACAACTTCAATACCCAAGCTCGATGTC
ACAAAATTTGCCTAGCCCAAGTCTCTTTGCCAATTAATTTCAACTCCACT
GCCGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCG
AAGAAGTTGTCCATATTGGCCCACGTTTAAATCAAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGG
AAATAGGCCAGGTTTCACCGTAACACGCCACATCTTGCGAATATATGTGT
AGAACTGCCGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTC
AGTTTGCTCATGAAACGTGTACAGGTGACACTATCCCATATCACAGCTCA
CGTCCTCATGCATACGAAATCGATGACATCATCAAGCGCAGATGTGATAA
GCGATAACCTGGCTATTTTTCTTACGTCTTAAAAGCCGT
UFO12137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34276-RB | 1819 | CG34276-RB | 550..823 | 83..356 | 1370 | 100 | Plus |
| CG34276-RA | 442 | CG34276-RA | 22..295 | 83..356 | 1370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15926373..15926581 | 148..356 | 1045 | 100 | Plus |
| 3R | 32079331 | 3R | 15926238..15926302 | 83..147 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:01:03 has no hits.
UFO12137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:44 Download gff for
UFO12137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34276-RA | 128..410 | 73..360 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:28 Download gff for
UFO12137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34276-RA | 153..435 | 73..360 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:53 Download gff for
UFO12137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34276-RA | 16..298 | 73..360 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:53 Download gff for
UFO12137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15926232..15926302 | 73..147 | 94 | -> | Plus |
| 3R | 15926373..15926584 | 148..360 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:28 Download gff for
UFO12137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11751954..11752024 | 73..147 | 94 | -> | Plus |
| arm_3R | 11752095..11752306 | 148..360 | 99 | == | Plus |
