UFO12140.5prime Sequence
544 bp (468 high quality bases) assembled on 2012-07-26
> UFO12140.5prime
GGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGC
ATACATTATACGAAGTTATCAGTCGACATGTCGGACGCACTGGAGGAGCC
ACCATTGTACCTTACGCCGCAGTTCTTCAGGCGCACCCTGGAGCACGGAT
TGCAGCAGCTGGACCTGCAGGTCATCGGTGTCCAGCTGACCAATCTGACG
CGTGGCGGGGAAAACTACTGCAGCAACATTTACCGAGCTCAGATTAAGTA
TCGCAATGCCGAGAGCTGCGCAATGGAGACATCCCTGATCGTCAAGTCCA
TGCCGGACGAGAAGCAGGCCATTCTGGCCCGCCTGCACATTTATAACAAG
GAGACGCTTTTCTACATGCACATCAAGCCCAAGCTGGAGGCACTCATGTG
GAGGGCGGTGGATAGTTTCAGCGCTTGGACTTTGGCTCCCAAGCACTACT
ATTCCACGACCCAGCCGGAGCAGACGATCATCCGGAGGACCTTTGCCCCC
CAGCTATCAGTTGAAGTGCCGCCACTGGGTCTGGACTTTGAACA
UFO12140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7135-RA | 1518 | CG7135-RA | 29..495 | 78..541 | 2230 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18103681..18104046 | 78..443 | 1830 | 100 | Plus |
X | 23542271 | X | 18104110..18104211 | 443..541 | 330 | 95.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:01:06 has no hits.
UFO12140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:45 Download gff for
UFO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 1..468 | 78..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:31 Download gff for
UFO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 25..496 | 70..543 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:55 Download gff for
UFO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 25..496 | 70..543 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:55 Download gff for
UFO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18103677..18104045 | 70..442 | 98 | -> | Plus |
X | 18104110..18104212 | 443..543 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:31 Download gff for
UFO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17997710..17998078 | 70..442 | 98 | -> | Plus |
arm_X | 17998143..17998245 | 443..543 | 94 | | Plus |