UFO12141.5prime Sequence
1182 bp (1058 high quality bases) assembled on 2012-07-26
> UFO12141.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGCTTCTGCGATCTCTACCAA
TTTTCCTTGCACTCTTTGTCCTTTCCAAAAGTGACACGGGTGCAGGTGAA
GATTCGGAAGAGGACGACGAAAACGACTGCAACCGGACGACTCTTGGTGG
TCATCCCGTGAACATAACCACAGCGCCATGGATTGCTTCCATTTCGATCA
AACAAAAGGCCAAGTGCGACGGAGCGATATACAAACTGAGTCACATTGTG
ACAGCCGGGAAATGTGTGGATGGATTCCTGAACAAGGTGATCCGTGTACG
AGTGGGTAGCACTACGCGCAGCGATGGAGTCATCGAAGTAGCAGTCTGCA
ACATTACAGTTCACGAAAAGTTCACCGGCCAGACAGTATTTCACAATGTG
GCCATATTAAAGTTGTGCGAACCGCTCGAGGCCTCCAAAACGATCCAGCC
AATTCAGTTGGCCAACCAGCTTCCGTCTAATGGGGCAAAGGTCACGGCCA
ACGGGTGGCCCTCCTTCAGGTGGTGGGCAATGTATTGGAAGAAGTGTCTG
GATGATGAAGCCTACAAGCTGCAGAAGGCCGAGGTGAAGCTACTTGGCCC
TAGCCAGTGCACAGATCTGTGGGCGCGAAACAATTGGTCCAAAAAGAATT
TTACAGATGACTTGTTCTGCACCGAGAAGTTCGCTAAGGAAGCCTGCTCT
TTAGCGATGGGATCACCTGTGGTCCACAATGGCAAACTGGTCGGCATTAT
AACGAAAGGCGGCTGTTCGGAGTATCCAGAAGTCTATATCAATCTTATAA
AGTACAAAGGACTGGCTGCATAATCATACAAAGGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATTAAAAACGCCCGCGCACGAGCGTTCTGAACAAATCC
AGATTGAGTTCTGAGTCATTACTGGATTTTAATCACCAGGATTCAAGCGA
AACTCGATATTCAAATTACCGCCCCGCCTGCCACTCATCGCCAGTTACTG
TTTTGTAATCATAGCATTCTGCGCACTTGGAG
UFO12141.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-RA | 1062 | CG32833-RA | 20..824 | 78..883 | 4005 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22984511..22985315 | 883..78 | 3980 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:01:08 has no hits.
UFO12141.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:45 Download gff for
UFO12141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 1..811 | 79..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:34 Download gff for
UFO12141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 20..831 | 78..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:58 Download gff for
UFO12141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 20..831 | 78..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:58 Download gff for
UFO12141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22984504..22985315 | 78..891 | 99 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:34 Download gff for
UFO12141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18872027..18872838 | 78..891 | 99 | == | Minus |
