Clone UFO12145 Report

Search the DGRC for UFO12145

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:121
Well:45
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13239-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12145.5prime Sequence

461 bp (384 high quality bases) assembled on 2012-07-26

> UFO12145.5prime
GGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGC
ATACATTATACGAAGTTATCAGTCGACATGGCGCTCAGCTCGACTGTTGT
CTGTCTTCTCGCCGGTTTGCTTCTCCTCAGTCTCGCGCGGGCAGATGTGG
GCGTGGCCACGCAGCGTCTTCGCCCAGCGGATCAGCAGAAATCGGCCCTG
TATCCAGCAGCCGGCTTTAAGCCCTCTAGACAGTTTGGCCTTCCGGCAAC
CGACCAGCAACCGAAATCCGCTCGCCTTGTGGCCAACAGTGAAGCGCAGG
AGGATCTCGACGACGCCGCCGAGGGGGGTGGAGGTGACGCAACCAAAGAC
AGTTTCTGGTGCCACGCCCTAGTTCCTGCTCCAGGGCCAGCATTTACCGG
GTAAACTTCCCCACCAATCGCATTACTATCCGGGCCCAAAGCCGTGGGGA
TATCGTCCAGG

UFO12145.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13239-RA 704 CG13239-RA 1..369 78..460 1555 95.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22860787..22861100 78..394 1420 98.7 Plus
Blast to na_te.dros performed on 2014-11-28 18:01:13 has no hits.

UFO12145.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:47 Download gff for UFO12145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..331 78..416 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:38 Download gff for UFO12145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..331 78..416 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:01 Download gff for UFO12145.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..331 78..416 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:01 Download gff for UFO12145.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22860779..22861117 69..416 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:38 Download gff for UFO12145.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22853879..22854217 69..416 96   Plus