UFO12148.5prime Sequence
357 bp (313 high quality bases) assembled on 2012-07-26
> UFO12148.5prime
GGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGC
ATACATTATACGAAGTTATCAGTCGACATGAATGATCAGCCAGTCGATGG
CGTCGTGCGCCTTCGTCTCAAGGTGGCCCAGTGGATCTACGGCATTGCGG
CGCTGTTCATTGTCCTGGCCATTGGGCTGCTCATCTTGCCGGGCCTGTTC
AGACGATACCTCCTGGTTCCGGATGTAGTGGCTACCTATTGCTTCTTTGT
CATCGGATTGGGTCACCCTGTGCGTCTATGTCAACGTCACTTGGCTGCGC
CCGGAAGTTTCCCCCTTCCAACTGGAATAGTCAAGCCTGCTGCATTAGCC
AGCCTTG
UFO12148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43779-RA | 836 | CG43779-RA | 1..260 | 78..345 | 1150 | 97 | Plus |
| CG16825-RB | 3020 | CG16825-RB | 1709..1968 | 345..78 | 1150 | 97 | Minus |
| CG16825-RA | 1888 | CG16825-RA | 577..836 | 345..78 | 1150 | 97 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13306533..13306755 | 301..78 | 1070 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:01:01 has no hits.
UFO12148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:43 Download gff for
UFO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15639-RA | 1..269 | 78..357 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:27 Download gff for
UFO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16825-RA | 568..841 | 70..357 | 95 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:52 Download gff for
UFO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16825-RA | 568..841 | 70..357 | 95 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:52 Download gff for
UFO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13306487..13306760 | 70..357 | 95 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:27 Download gff for
UFO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13306487..13306760 | 70..357 | 95 | == | Minus |
