UFO12149.5prime Sequence
660 bp (559 high quality bases) assembled on 2012-07-26
> UFO12149.5prime
TGAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCG
TATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTCTTTGCTCT
GTGTGCCTTCCTCCTCATTGCCCTGGCTACCGTCCAGGCAACTCCCGGTG
ATCTGCGCCATGTTCCTGTAGGACACGGAGGACACCCAGTCAATGCTGGC
CACGGACCTGTGGGACACGCTGGTCCTGTTGGACACGGTCCAGTTGTAGG
CCATGGTCCAGTTGTAGGCCATGGTCCAGTTGTGGGACATGGTGTTCATG
GTCATTCTGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGGAGTCCCAAGCGAGCTCGATATCAAAAT
TACCGCCCCCCGCCCTGCCACTTCATCGCAGTACTGGTTGGTAATTTCAT
TTAAGCATTCCTGCCGACCTTGGAAAGCCATCACAAAACGGCATGGATGG
AACCTTGAAT
UFO12149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42500-RB | 440 | CG42500-RB | 99..326 | 84..311 | 1140 | 100 | Plus |
CG42500-RA | 344 | CG42500-RA | 3..230 | 84..311 | 1140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14152325..14152552 | 311..84 | 1140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:01:20 has no hits.
UFO12149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:48 Download gff for
UFO12149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42500-RA | 1..245 | 83..325 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:42 Download gff for
UFO12149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42500-RA | 1..245 | 83..325 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:03 Download gff for
UFO12149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42500-RA | 1..245 | 83..325 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:03 Download gff for
UFO12149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14152310..14152552 | 84..325 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:42 Download gff for
UFO12149.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9978032..9978274 | 84..325 | 97 | | Minus |