Clone UFO12151 Report

Search the DGRC for UFO12151

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:121
Well:51
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG13947-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12151.5prime Sequence

1105 bp (981 high quality bases) assembled on 2012-07-26

> UFO12151.5prime
CAGTCGACATGCGTTCCTTCATCATCATCGCCCTCTTCGCACTGATTGCC
GTGGCTGCCGCTCAAGGTGGACCCCAGGGCGGACCTCAGGGTGGACCTCA
GGGTGGACCTCAAGGTGGACCACAGGGCGGACCCCAGGGTGGACCTCAAG
GTGGACCCCAGGGTGGTCCTCAGGGAGGACCCCAGGGTGGACCGCAGGGA
GGACCCCAGGGTGGTCCTGGTGGACCCGGTGGACCCGGGGGACCGTGGGG
ACTGCCTCCAAATGCCACTCTTCCCAGCAACAGCACTACCACCACCACCA
CTTCAACGACCACCGAATCCAGCACCAGCACAACCACGGAAGCCAGCACC
GAGTCATCCCCTGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCC
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGATA
TATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGA
AACGTTCAGTTTGCTCATGGAAAACGGTGTAACAAGTTGACACTATCCAT
ATCACCAGCTCACGTCTTTCATTGCATACGAATCCGATGACCATCATCAG
GCGGCCAGAATGAATAGCGATACCTGGCCTATTTCTTACGGATCTTTAAA
AAGGC

UFO12151.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG13947-RA 483 CG13947-RA 32..388 9..365 1785 100 Plus
CG13947-RA 483 CG13947-RA 84..193 109..218 385 90 Plus
CG13947-RA 483 CG13947-RA 132..241 61..170 385 90 Plus
CG13947-RA 483 CG13947-RA 92..177 129..214 250 86 Plus
CG13947-RA 483 CG13947-RA 152..237 69..154 250 86 Plus
CG13947-RA 483 CG13947-RA 89..181 138..227 245 84.9 Plus
CG13947-RA 483 CG13947-RA 161..250 66..158 245 84.9 Plus
CG12506-RA 471 CG12506-RA 49..134 9..94 235 84.9 Plus
CG13947-RA 483 CG13947-RA 84..150 145..211 215 88.1 Plus
CG13947-RA 483 CG13947-RA 168..234 61..127 215 88.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 779204..779560 9..365 1785 100 Plus
2L 23513712 2L 779256..779365 109..218 385 90 Plus
2L 23513712 2L 779304..779413 61..170 385 90 Plus
2L 23513712 2L 779256..779370 97..211 305 84.3 Plus
2L 23513712 2L 779292..779406 61..175 305 84.3 Plus
2L 23513712 2L 779264..779349 129..214 250 86 Plus
2L 23513712 2L 779324..779409 69..154 250 86 Plus
2L 23513712 2L 779261..779341 138..218 240 86.4 Plus
2L 23513712 2L 779333..779413 66..146 240 86.4 Plus
2L 23513712 2L 773595..773680 9..94 235 84.9 Plus
2L 23513712 2L 779256..779322 145..211 215 88.1 Plus
2L 23513712 2L 779340..779406 61..127 215 88.1 Plus
Blast to na_te.dros performed on 2014-11-28 18:01:23 has no hits.

UFO12151.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:49 Download gff for UFO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13947-RA 1..364 7..370 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:45 Download gff for UFO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13947-RA 32..392 9..370 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:05 Download gff for UFO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13947-RA 32..392 9..370 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:05 Download gff for UFO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 779204..779560 9..365 100 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:45 Download gff for UFO12151.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 779204..779560 9..365 100 == Plus