UFO12153.5prime Sequence
1087 bp (1020 high quality bases) assembled on 2012-07-26
> UFO12153.5prime
TAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATA
GCATACATTATACGAAGTTATCAGTCGACATGTCCAAGCTGGGTGCTATC
TTGTTGGTGGGCTTGTGCCTGTTTGTGGCCGTGGCCTTGGCCGAGCCACG
CCTTCAGCACGTTCAGGGGCGCAATCAGGTGCAGGGTCAAAGGGCGCAGC
AGCATCCCTACCTCTTCCTGTCAATTCCCAAGGGTCGGGCCAACGCCGGC
GCCGTCGTCCAGGGCTTCGAAATTGTCGAGGAGGAAGATGATGATCTACA
TGATGAGGACCAGCACGATGACGAGACGGAGGATGACGAGGAACTGGAGC
ATCAGCTGGGCCTGAACTTTGCCCGCAGCGGTCTGGCTTACAGGCAGAAC
CACGCTGATGACGAACAGGACGATGATCAGGATCAGGAGCAGGATCACGT
TCAGGATGAGCTGCCCAAGAAGCAGATGATGGTTAACCGGGATCAGGCTG
GTGCCATTATGGTGCCCGATGGCATTATCGAGATCGAGGGTCAGAGTGTT
CTGGACGAGAAGACCGGCAAGGCGGCTCTCCTAGTGCCTCGTGCCGCCCT
AGACGCCATTCCCGATGGCGCGGTGGTGGCTCTTATGGAGCGATCCGCCT
CATCCGTTGATGAAATCGAGGAAGAGCGCGCCAACCGCGTGGTAGTTCGT
CGCCGCAAGAACAACGGACGCAGGAACATTCGCCGCCGCGGCATCAACAA
CAACAATATCCGACGCCGCCGCCCCGCCCAAAGGCGTCGCCGAGTGGGTG
GCAACCGCAGGCGCAATGTACGCGTCATTCGCCCCCAAGGCGGGCAACCG
TAGGCGTGCAACCAGATGCGCCGCGGACAGGTCGTATTCCAGGGTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGAGGCCCAGGTAGTGGTCATAATC
ATAATCATAATCATATCATAATCACACTAGCCTACGGAGAATCCTGTCAT
GACTAGTGCTTGAATTCTCACATAAAAAACGGCCCGGCGGCAACCGAAAC
CGTTCTGACACAATCCGGATCGAAGTTCTGAGGTTCA
UFO12153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 1047 | CG3598-RA | 102..917 | 80..895 | 4020 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2937128..2937943 | 80..895 | 3970 | 99.6 | Plus |
Blast to na_te.dros performed 2014-11-28 18:01:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3279..3352 | 712..785 | 118 | 62.2 | Plus |
UFO12153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:50 Download gff for
UFO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 1..816 | 80..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:47 Download gff for
UFO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 80..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:08 Download gff for
UFO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 80..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:08 Download gff for
UFO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2937128..2937943 | 80..895 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:47 Download gff for
UFO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2831161..2831976 | 80..895 | 99 | == | Plus |
