UFO12174.5prime Sequence
320 bp (234 high quality bases) assembled on 2012-07-26
> UFO12174.5prime
GGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGCA
TACATTATACGAAGTTATCAGTCGACATGCACTTCAGTTGGCTGTCAGAG
AAAGCGCCCACGCCGCCAGCCACCTGGGCCGATCACTCGTACTTCTTCCG
TCCGCAATACTATAAGGTGACCGTATCCGAGCGCGATCACCCGGAACGGA
CGCACGTTTACTTCAATGAGACGATCATACCGGAAGAACCAAAGGACTAA
ATGGTTCAGATTTTATGCCAATTGAATTTTCAAAATCATCGTTTTCATTT
GTAACACCATCAAGCTGAAG
UFO12174.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cher-RF | 3602 | CG3937-RF | 336..573 | 77..320 | 1055 | 97.1 | Plus |
| cher-RH | 3502 | CG3937-RH | 247..473 | 88..320 | 1000 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17098044..17098269 | 307..77 | 910 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:01:56 has no hits.
UFO12174.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:57 Download gff for
UFO12174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cher-RF | 336..573 | 77..320 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:04 Download gff for
UFO12174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cher-RF | 336..573 | 77..320 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:27 Download gff for
UFO12174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cher-RF | 336..573 | 77..320 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:27 Download gff for
UFO12174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17098031..17098283 | 60..320 | 93 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:04 Download gff for
UFO12174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12923753..12924005 | 60..320 | 93 | -> | Minus |
