UFO12183.5prime Sequence
1022 bp (885 high quality bases) assembled on 2012-07-26
> UFO12183.5prime
AGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAG
CATACATTATACGAAGTTATCAGTCGACATGGTCATTCCAAAGGAGATCC
TAAGCGACTTCAAGGAGCTATACGAGAAGGCCAACCGTCTGGTGGAGGAG
GAGAGCCGCAATGATCCGCCCACGGATCCATTCCGCTCCCATTATAAAGC
GCGCGATGTGCTAATTGTCTTGAAGAAGCAGCTGGACGACCAACTGGTAT
CTGTGCAGGCCAGCGAGGAGGACGGTGGTCAGGACGATCGCTGCTATCAC
TCTCTGTTGGCCTTCGTTTGCCGGGATCTAGGCAGGATCTACATCTACAC
AGAGGAGCAGGCAGAGGGCGAAAAGATGCTCAATCGTTGTCTGGAACTAG
TCACGCCGTTTAAGGAGTGCCCTGAGGGCATCATTCCATTCATTGGGGCA
ATCAACGAGCTTAGCATTGTGCTGGCCTCCAAGGAAGAGTACAATAAGGG
ACTGGAAATTCTCCTGGAGGCAGAAAAAATCTACGAGGACTTCAAAGCCA
GTGGTCTGAAGCCCCTGGCCATTCAAGATGTGTTCAATCCTCCGGAGGAG
GGACAACAATCTCACGAAGCTGGTCCCAAGGAACTGGAATCCCTGTACAC
GCTAGTCTCATTTTACATGGCGCAAATGTACGGGCATTTGGGTGAGCCGG
AAAAGTCGGCCAAGTGCTGCCATCGCACCCTCCATCGACAGCTTGAGTCA
AAAACATACGATCCCATTGATTTCGCACTGACACCGCCACCTTGTCACAG
TTCTATATTGGAGAGAGCGCTTCGAGGAGCCCGTCATCACTGGCCGCTGC
TACGCTCATCATGCGATATGAGTGCACATGCTGAGCCGAGATGAGCGAGA
GCAGCGCAGACGTGTCGAGAACTTAACATCGCTACGCGATGTGCACGCTG
TGGGCAATATGAATGATTATGACCATCAGCTCCGCTGATGCGACGAATGA
CCAGATGCAGACTGAAATCGTC
UFO12183.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14043-RA | 1986 | CG14043-RA | 102..1001 | 70..951 | 4025 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4971803..4972600 | 70..863 | 3760 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:01:50 has no hits.
UFO12183.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:47:55 Download gff for
UFO12183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14043-RA | 96..1012 | 66..961 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:00 Download gff for
UFO12183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14043-RA | 98..1014 | 66..961 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:23 Download gff for
UFO12183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14043-RA | 98..1014 | 66..961 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:23 Download gff for
UFO12183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4971799..4972715 | 66..961 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:00 Download gff for
UFO12183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4971799..4972715 | 66..961 | 97 | | Plus |
