UFO12185.5prime Sequence
579 bp (430 high quality bases) assembled on 2012-07-26
> UFO12185.5prime
GAATAGGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGT
ATAGCATACATTATACGAAGTTATCAGTCGACATGTCACCCAAGGACGGC
AGCCTGGGCGATGCTAAATTCGCCAAGTATACGGTGAACCATGAGCCGCC
ACCTCCTTCGGCGATGACGACGACACAGTCCACCAACAGTGGTGTGGATA
AACCGATAGCTAAGGAAAAGGACAATGGCACAACGAATCCGCCCGTGAAA
CGATCCTGGCGCGAGAAGATCCGCCTGGTGGCCAACAATGTCACCGTGGA
ACCGATCCTGGCCGCCTACATCATGCCCAGCGTGCTCTCCAATCTGGCCA
CCCAGAATCTTAACCCTGGAGAAGGGCCTGTCGAGTGAAACATGGGCCCT
ACGGGGGAATGAAGGTTGTTGCCAATGCCCCTCCCCCCCGCCCCCCAAAC
AAACCCCACTTTCCCCCCTTAAAGGGAAGGAAAACCGTGGGCAACCAAAA
TGGGGGGGCCCCCAAAAGGGCCCCCCCTGGAAAAAAAAGGGGAATTCCAC
CCCCCGGGTTTCCCCCCGGGCCCGGGGGA
UFO12185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:02:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15890-RB | 2702 | CG15890-RB | 387..705 | 83..406 | 1505 | 98.5 | Plus |
| CG15890-RA | 2705 | CG15890-RA | 390..708 | 83..406 | 1505 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14760061..14760365 | 389..83 | 1435 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:02:13 has no hits.
UFO12185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:48:01 Download gff for
UFO12185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 382..719 | 74..422 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:18 Download gff for
UFO12185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 382..719 | 74..422 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:38 Download gff for
UFO12185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 382..719 | 74..422 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:38 Download gff for
UFO12185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14760026..14760375 | 75..433 | 93 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:18 Download gff for
UFO12185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14654059..14654408 | 75..433 | 93 | -> | Minus |
