Clone UFO12191 Report

Search the DGRC for UFO12191

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:121
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG6197-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12191.5prime Sequence

837 bp (729 high quality bases) assembled on 2012-07-26

> UFO12191.5prime
GGGAATTGGGAATTCGTTAACAGATCTGCGGCCGCATAACTTCGTATAGC
ATACATTATACGAAGTTATCAGTCGACATGGTGACAAAAACGATAAAATC
TCTGAATTTAGAGATCAATTTCGAAGTGGAGGATGTGCCGTATGAGGAGG
AAATCCTTCGAAACGCCTACTCCGTAAAACATTGGCTGCGCTACATTGAT
CACAAAGCGAAGGCGCCGAATAATGGTGTTAACATGGTCTATGAGCGTGC
TCTGAAAGAGCTTCCTGGCAGCTATAAGATCTGGCACAATTACCTGAGAA
CTCGCAGGAAGCAGGTGCGCGGCAAGATACCCACGGATCCCATGTACGAG
GAGGTCAACAGTGCCTTCGAACGTGCACTGGTGTTTATGCACAAAATGCC
ACGTATCTGGATGGACTACGGTGCCTTCATGACCTCGCAATGCAAGATTA
CCCGCACCCGGCACGTTTTCGATCGGGCTCTAAGGGCTCTGCCCATCACG
CAGCACGGCAGGATTTGGCCACTGTATTTGCAGTTTGTACGCCGCTTTGA
AATGCCGGAAACAGCACTGCGAGTCTACCGTCGATATCTGAAACTCTTTC
CCGAGGACACAGAGGAATATGTGGACTACCTACAGGAAGCAGATCGGCTG
GACGAAGCTGCCCAGCAGCTGGCGCACATCGTCGACAACGAGCACTTCGT
TTTCCAAACACGGCAAGTCCAAATCCTTCAGCTTGTGGAACGAAATTTGT
GCGGACCTCCATCCCCGAAAGAATCCCACCCAAGGTGTGCACCCCCTTGG
AACGGGGAACCCCACTCCTTTGGGGGGGGGCGGTGGT

UFO12191.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
fand-RA 2793 CG6197-RA 83..781 78..787 3240 98 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:02:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13593829..13594427 123..722 2950 99.8 Plus
2R 25286936 2R 13593726..13593771 78..123 230 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:02:21 has no hits.

UFO12191.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 09:48:03 Download gff for UFO12191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6197-RA 78..742 78..747 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:23 Download gff for UFO12191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6197-RA 83..747 78..747 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:43 Download gff for UFO12191.5prime
Subject Subject Range Query Range Percent Splice Strand
fand-RA 83..747 78..747 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:43 Download gff for UFO12191.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13593726..13593770 78..122 100 -> Plus
2R 13593829..13594471 123..775 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:23 Download gff for UFO12191.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9481231..9481275 78..122 100 -> Plus
arm_2R 9481334..9481976 123..775 98 <- Plus