UFO12227.5prime Sequence
698 bp (698 high quality bases) assembled on 2012-09-06
> UFO12227.5prime
GTCGACATGTTGATTACCCAAATAATTATGAAACAAATTCGAGACTATCC
CATTGTGTCCACAATAAGCATTGCCGTCAGCACTGTCCTGGCCTCAGAGG
TGATTTGGAAGCTGGTGCAGTGCTCGCGCAGCAAGCGAGAGAAGGCAAGC
CGCGTGCACGAAGTGATCATCTTCAATGAACTGGGCGAGATCTGTGCGGC
GGTGCATATGCGCAACAGCAGCATGGGATCCCAGAAACCACAAGTGTCGC
CCTGCTGCAACACGCATTGTTCGCTGCGGAATGTGGCCAAGATCGTAGAG
CAGATCGATCGGGCTGTATACTCCATTGACCTGGCCATATACACCTTCAC
CTCGCTTTTTTTGGCGGATTCAATAAAGCGGGCCCTGCAGCGCGGCGTGA
TTATCCGGATCATCAGCGACGGGGAGATGGTCTACTCCAAAGGTTCTCAG
ATCAGTATGCTGGCACAATTGGGAGTTCCAATTCGCGTCCCCATTACCAC
GAACTTGATGCACAACAAATTCTGCATAATCGACGGCTTCGAGCGCGTCG
AGGAGATTCGTCTGCTGAGGAAGCTCAAGTTTATGCGTCCCGTGCTATAG
CATCGTGATCCGCGGCTCCCGTAAACTGGACGGCTCTTTGGACTGGGAGG
CACTTGGGAGAACTTGCATTATCACAGCTGACGACAAACTCACAGCCA
UFO12227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
zuc-RA | 1148 | CG12314-RA | 59..746 | 7..698 | 3315 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11989137..11989824 | 698..7 | 3215 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:05:53 has no hits.
UFO12227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:10 Download gff for
UFO12227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zuc-RA | 31..724 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:38 Download gff for
UFO12227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zuc-RA | 52..745 | 1..697 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:42 Download gff for
UFO12227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
zuc-RA | 52..745 | 1..697 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:42 Download gff for
UFO12227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11989138..11989830 | 1..697 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:38 Download gff for
UFO12227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11989138..11989830 | 1..697 | 98 | | Minus |