UFO12228.5prime Sequence
1101 bp (980 high quality bases) assembled on 2012-09-06
> UFO12228.5prime
AGTCGACATGGCCGGCGGATTTCGACCGTACGATCAGGACTCGTGTCCTA
ACCTTACAAATAGCGAGGCTCCGGAATTCAGCATGTCAGTCGTTTGCAAA
ACGGAGCCGCACTACTTTCATCCGCAGACTGCTATCCTGCCCAGCGTCCA
GTACTCCCACCCATATCACCACTATCTGAGCCAGTTCGCCCCGAACTTCG
TGCCCTACTACTACCGCCTGCTCTCGCGGCCCATAATGAAGCAGGAGGAG
ATGGACATCGAGAACTACATCAACTACGAGGTGGCCGCCCAGCAGACCAT
GATGCGCCAGCGGACCCTGAAGCCCCTGGGTCAGCTGCAGATCCAAATGC
CGCCTCCCATAATAGTCAACCAGCCAGTTAAGCCAGTTCCCGTTAAGGCA
GTGCCAGTCCGCCGAAGCTCTCCGCCCAAGCGACGCGTCATCAATGCCCA
GTTGGTAGCGGTAGCCACCGCTTCCGGGGGCATTAAGAACATCGAACCGC
GGGTGGAGCCACTGCCTCGCCTGGAGGAATCCTTTAAGCAGCAAGTGGCC
AAAATCCAGAAGAGTCAGCACCACTACGAACAACTCTTTGGTCGTCTCAC
TTCCATGCTAAAGACCCTGAATCAGCGGTACGACAACGATGCCGAGGATG
TGCCCGCGCCGCCCTCCAAGAGACCGCGCCACATGTCCACCAGTTCGTCG
GAATCGCACATCCCAGATACTGCCTCTGAAAAGGACGAGAAAGACACTCT
TGTGCAGTACCCGCACCGAGTGCAAAAGGAGGACGGCTGTGCGGTGTACG
TACTGGGACCCAATGGCCACCCAGATCACAGCCCATCAGTACGGTGAGGT
CTTCTGGACCAACGCCCCGGTGGCCACGAGGTGTCTTTCTTTGCGTTGTC
TTCAGCAGCGATGAGTTGGCTACCCACACGCTGACCGGGAAGCCGTCGCC
CGCATTCTACGGTGCGAATGACCCCCAAGCTTCAGTAGACAACGCAGATG
ACGAACACGTTGTCTGTGTGTGAACTGGACGGGCTGAATGAAACGGGTGG
ATTCGGCACCATCACTACCTATGTGTGCGGATACCGTCAGAAAGTACATG
A
UFO12228.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba2-RA | 1493 | CG9883-RA | 177..1272 | 8..1098 | 4900 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2577863..2578832 | 8..978 | 4665 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:05:56 has no hits.
UFO12228.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:11 Download gff for
UFO12228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9883-RA | 186..1145 | 1..962 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:43:40 Download gff for
UFO12228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba2-RA | 170..1129 | 1..962 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:44 Download gff for
UFO12228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba2-RA | 170..1129 | 1..962 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:44 Download gff for
UFO12228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2577856..2578815 | 1..962 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:43:40 Download gff for
UFO12228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2577856..2578815 | 1..962 | 99 | == | Plus |
