UFO12251.5prime Sequence
1108 bp (986 high quality bases) assembled on 2012-09-06
> UFO12251.5prime
AGTCGACATGGCTTTCAAGTACAATACACAAATGATCCTGCTGAGCTGCG
GTTTGGCTGTGCTCTTGGGCTTCTCAGAAGCCCTACCTCGATACAGTCGA
ACCAAAGACCTGGGAACATCCGCCAGCTTCCCCAGCTTCGCCTATGCACC
CAGGCCACAGGAACCGATGACCCTCACTGGGAACTACAACCTCATCATGC
CCGACTACTACGATCACCATCCCGCGGAGTCCATGCAACTGCAAAACTTT
GCCAACTTCTACGATGCCCAAATGAGTCCCGACTCTGATCTCGGAATGGA
GGAATCGCAGTTTTTGAGCCACACTCCAGTGAGGGCACCTCAGCCCTTGA
CGGCCGAGGAGAAACGTGCTCGTCAGCAGATTCCCCACGTGGACATCAAC
CGGGAGAAGAAGGCCCTGCTCAAGCTAAAGAAGGGCAGCACCAAGCCCAG
AGGAGCCGATCACCAGGAGTGGGACCAGTTCGACTACGATTTGTACAGCC
TGAATCCCGGCGATAGCAAGAAGTACAACTACGATGCCGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATATATTTGCCCATGTGAAACGGGGGCGAGAGTGTCATATGCACGTTA
ATCAAACTGGTGAACTCACCAGGATGCTGAACGAAAACATATCTCATAAC
CCTTAGAATAGCCAGTTTCACGTACACGCCAATCTGCCAATAATTGTGTA
GAACTGCGAAATCGTCGGATTCACTCAGGCGAGTAACGTTCAGTTGCTCA
TGGAAACG
UFO12251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5391-RA | 782 | CG5391-RA | 151..681 | 8..538 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22333189..22333693 | 538..34 | 2525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:06:39 has no hits.
UFO12251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:23 Download gff for
UFO12251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 144..681 | 1..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:11 Download gff for
UFO12251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 144..681 | 1..538 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:08 Download gff for
UFO12251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 144..681 | 1..538 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:08 Download gff for
UFO12251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22333189..22333692 | 35..538 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:11 Download gff for
UFO12251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18158911..18159414 | 35..538 | 100 | <- | Minus |
