UFO12253.5prime Sequence
1099 bp (1028 high quality bases) assembled on 2012-09-06
> UFO12253.5prime
AGTCGACATGCCGGCAAAAAAGGAATCAAACAAGGGTGCTAAGAAAGGAG
CTGCCGCTCCAGCTGGTGCCAAGCCGACCGCCGATCCTGTGACTTCCGAA
TCGAACAACGCAGCGGAACCAGCCGCCAAGGAAGCCAAGGGTTCCAAGAA
GGGCAAAGGCAAAAAGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTG
CGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGA
GCGATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGGTGAA
CACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATTCC
GGGATGAGCATTCATCAGCGGGCAAGAATGTGAATAAAGGCCGGATAAAC
TTGTGCTTATTTTTTCTTTACGGTCTTTAAAAGGCCGTATATCCAGCTGA
CGGTCTGGTTATAGGTACATTGAGCACTGACTGAATGCCTCAAATGTTCT
TTACGATGCCATTGGATATTATCAACGGGGGATATTCCAGTGAATTTTTT
TTCTCATTTAGCTTCCTAGCTCCTGAAAGATCCATGCTCTGTATAGCAT
UFO12253.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:06:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12853-RA | 329 | CG12853-RA | 84..245 | 8..169 | 810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14933668..14933829 | 8..169 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:06:41 has no hits.
UFO12253.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:24 Download gff for
UFO12253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12853-RA | 77..251 | 1..177 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:14 Download gff for
UFO12253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12853-RA | 77..251 | 1..177 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:09 Download gff for
UFO12253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12853-RA | 77..251 | 1..177 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:09 Download gff for
UFO12253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14933662..14933829 | 1..169 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:14 Download gff for
UFO12253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10821167..10821334 | 1..169 | 97 | == | Plus |
