UFO12256.5prime Sequence
1104 bp (960 high quality bases) assembled on 2012-09-06
> UFO12256.5prime
AGTCGACATGAAGAGCCTTTTTGCTACCATGTTGGGCTACTTGCTCCTTG
GGTTGGTGCTGTCTCATGCCAGCTTTGCAACTGCCACAAATGGAGTTATT
CCAGCAGTGATTCCGGCAGTGCCCGCTACTGTTCCTCGCCTGGTTCCCGT
GGCCACCAGCCATCAGTTTGTCACTCGAAACTGGAATCGAGTTTTCGTGC
CCCCCGCCACGGTGGCCACTTATCCCAACACCTATGTTAAGTACAGCGGT
GGCTATCCGGCGTATCCCGCCTACAATTACCCATACGCCACCACCTATCC
GTACACCTATCCCTACTACTATCCCACTTATAACGTTGGATATGGTTACA
AGGGTGTCTGGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGGCGAAGAAGTTGTCCATATTGGCCACGTTTTAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAAACATAATTCTCAATAAACCCT
TTAGGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCCTTGCGAATT
ATATGTGTAGAAACTGCCGGAAATCGTCGTGATATTCACTCCAGAGCGAT
GAAAACGTTCAGTTTGCTTATGGAAAACGGTGTTAACAGGTGACCACTAT
TCCATATCATCAGCTCACGTTCTTTCATGCATACGAAATTCCGATGACAT
TCATTAGCGGCTAGATGGTGAATTAGGCCGACAAAACTGGTCTTATTTTC
TTAC
UFO12256.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13026-RC | 1431 | CG13026-RC | 45..399 | 7..361 | 1775 | 100 | Plus |
| CG13026-RB | 599 | CG13026-RB | 45..399 | 7..361 | 1775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16725710..16726054 | 361..17 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:06:49 has no hits.
UFO12256.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:27 Download gff for
UFO12256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13026-RB | 39..405 | 1..368 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:20 Download gff for
UFO12256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13026-RB | 39..405 | 1..368 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:15 Download gff for
UFO12256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13026-RB | 39..405 | 1..368 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:15 Download gff for
UFO12256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16725710..16726056 | 14..361 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:20 Download gff for
UFO12256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16718810..16719156 | 14..361 | 99 | | Minus |
