UFO12265.5prime Sequence
1048 bp (957 high quality bases) assembled on 2012-09-06
> UFO12265.5prime
AGTCGACATGGCCGAAACGAGCGAAAAGATCAAGTTCCTTGTGGCGGACA
CCACAGCCTTTATAAACGCCGTGCCCCTGAATGAATACGCGGAGCAGGTG
CTCACCGTGCCGGATGTGGTGGCCGAAGTGCGCAACAAGCGCCAGATTCG
CCGCCTCTGCGTTCTGCCCTTCGACCTCCAGGTGCGCGAGCCTCGTCCGG
AGAGCATTAAACACTGCGTGGAGTTCGCCAAGAAAACGGGTGACTACGCG
AGTCTCTCGGGGATCGATCTGAAAGTGATCTCGCTCACCTACGAACTGGA
AGCAGACAACGTGGGCACTGATCACCTGCGCCAGGAGCCTGTGATGGCGC
AGACCATTGCGTCCAAGGATAAACCCGAGGAGATGCAGGATGCTAATAAC
AAGAGACTGGTCGGTTGGTACATGCCCGAGGGCGAAGAGGAGGAGGAGGA
GGATTCCGAGGAGGAAGATGATTACTCCCAGGAAGAGGACGATGCTGAAG
GCGATGAGCAGGAGGCAAATGAATCCCCAGACACTGTTAAAGCCGCCATC
GAAGCCCAATTGGCCGGCAAGGAACCATTTGCCAGCGAGACCATCGAAAA
GGAGGAGGACCAAGACCAGGAGCCCAGTCAGGAGGAGCTGGACAAGCTGT
TCGAGCAGCTCAAATGCGCACCCAGTGCCGAGGAAGAGAAAGAGCTCTCG
GAACTGCTCGTTTCCCAGCCGGCCGAAGTAGATGAGGAGGTATCCGAGCC
ACAAGAAGCCAAACAGAGCCAAAATCTCGACGAGGATGTGGGTGACGATG
GCTGGATCACGCATTCAAACATCAAGAAGGCCAAGAAAGCGCTCGAGGGC
AAAGTGGAAACGGATGAGTGCCGCCCGTCGCTGCATGACACCGATTATGC
GCTGCAGACGTGCTCAAGCAGCTAATCTCACTGCCGCCCTCATGACGGAT
CATCAGCAGTGCGCACATATATACTCGCTGCTACGCGGTGCTACAGACAC
AGCATCATGACTAAGTGTTTGGCTATTGGGCACAGACCTGAATGAGTC
UFO12265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2972-RB | 1838 | CG2972-RB | 95..1123 | 8..1020 | 4670 | 98.1 | Plus |
| CG2972-RA | 1630 | CG2972-RA | 95..1123 | 8..1020 | 4670 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10083382..10084228 | 83..925 | 4035 | 99.5 | Plus |
| X | 23542271 | X | 10083248..10083323 | 8..83 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:07:07 has no hits.
UFO12265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:32 Download gff for
UFO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 72..1110 | 1..1023 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:44:33 Download gff for
UFO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 88..1126 | 1..1023 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:24 Download gff for
UFO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 88..1126 | 1..1023 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:24 Download gff for
UFO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10083241..10083322 | 1..82 | 95 | -> | Plus |
| X | 10083382..10084338 | 83..1023 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:44:33 Download gff for
UFO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9977274..9977355 | 1..82 | 95 | -> | Plus |
| arm_X | 9977415..9978371 | 83..1023 | 97 | | Plus |
