UFO12285.5prime Sequence
1149 bp (1037 high quality bases) assembled on 2012-09-06
> UFO12285.5prime
AGTCGACATGGCAACGCCACAGCCGCAGCCGCAGCTGGAGTTGGGTTCGT
GCCAGGAGGCGCAAACTGAGCCGGCGGTCAGCAAGTTGGTTTCCCAGTTA
GAGCCCCTGACCACAATGGACACCGTGGACGCGGAGCGCGTCTGCCGCGT
GTGCCTAAAGGATGTATCGTTGGAGGGGGAGCTACACTTCATCTTCAACG
AAACGCCCGTCGAGCAGGACGCAAATCTGGCCCGCATCCTGGACGAGTGC
ACCCTGCACCAGTGCGAGCGAAACGACGGCATGCCCCCACATATGTGCAG
CTCCTGCGTGGAGGCGGCCCGCAACGCCTACCGCTTCAAGCGGCACGCGG
AGCGTTCCTACTGCTCGCTGGTCGCATTGCTGGGCCGGTCGCCCCAGCTG
AAGGCGCGAGGAGCCGAGGCGGCCAGTCAGACGGATCAGGTGGCCTTGCT
GCCATGCGAAATGTGCCACGACCAGTTCCTCAACAGCCTGGAGCTCAGGC
TGCACCGCAACCAGGTGCACAGAACGACCAAGGAGGCCACGTCGGCTGGC
ACAGATGGCCTGCCATCCGAGGATTTTAAGTGCAAATTTTGTCCGCAGCA
TTTCCCGCATCTCCGACAGCTGCGCAGCCATTTGGCGCGCAGCCACGAGC
AGACCGCACGTCTACAGTGCGCCCATTGCCAACGCACCTTTAGCCGGCGG
GATCATTTGCTGCGCCACATACGCAATCAGCACCGGGATGTGGAGGAGGA
TCTTTTGCGCACCTGGCCGCCGGCGGACGAGAATACTATGAACAGCGATG
GCGGAGATGAGCTGGTCTCTGCGGAGGTGCTGTTAAACGAGGAGGATAAC
GAAGATGAAGTCGTTGGGGAAGCCTTTCAGTGCATACGAATCCCATTTCC
AGTAACGAAGATGATGGCGAAGAGCCAATGGGGCCATCAAACGCTGTGGC
TGCACCATCAAGCCGGAACCCTGCCTGGAGGCGGAAGAAGTCGACCTGGC
CATGCAGCTAAAGCCTCGAGAAGAAGCGTCGACGGCGGGAGAAGCCAGAG
CTCAAGGCGGAAACTTCCATCGATCGACTGGTGAGACGAAACACATTTGC
CATCGGCGACTTCTCAATTCAGCATTTAGGAAAATCCACTGGTGCCACG
UFO12285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2202-RA | 3363 | CG2202-RA | 138..1263 | 7..1132 | 5270 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10848894..10849964 | 7..1076 | 5010 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:07:51 has no hits.
UFO12285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-06 17:02:44 Download gff for
UFO12285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2202-RA | 130..1258 | 1..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:03 Download gff for
UFO12285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2202-RA | 135..1263 | 1..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:53 Download gff for
UFO12285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2202-RA | 135..1263 | 1..1132 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:53 Download gff for
UFO12285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10848891..10849975 | 1..1085 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:03 Download gff for
UFO12285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10742924..10744008 | 1..1085 | 98 | -> | Plus |
