UFO12305.5prime Sequence
704 bp (559 high quality bases) assembled on 2012-10-16
> UFO12305.5prime
AGTCGACATGGCGACCTACTCCAACCAGCATTGGCTGCTCTCCCACATCC
GCAACTCCTTCATATCCACGGACGACACCGGAATGTGCGAGACGGTGATG
CTGAGCGATGACATGCCCAAACACTATTTGCGAAAATTCGGTAACTCGGG
CGCTGGAGGAGATCACTATCATTGGCGACGGGCGCACAAGACACCGCCGA
CGGGGGGCGGGACAACACCGGAGCGGAACACCCGGCATCCGGATGCGCCA
CTCCAGGAAGTGGACTTCATCTGCTATCCGGGACTGGACCTCAGCGACGA
CGAGGAGGACATGTCCACGCACTCCTTTGACATCCAAATGTATCCGGAGG
TGGGCGCCCACCGCTTTCGCTCCAACACTGCCCAAAAACTAGAGAAACTG
GATATTGCCAAGCGAAGGGCGGCGCGCATCAAGAGTGTTAACTACCAGGA
GGAAGTGCAGCCACCGGAGAGCGATGATTTCTTTAAACGCAAAGAGTTGC
CCCTCAGCAAAGCTGAGCGAGTTAAAAATGAAACCGAAAGCCAACGACGA
TGATCTGTCAGATGAGGGTGTTCAGAGCCAGCTCACTGAACAGTTGGGCC
AAAAGTCCAAGCAAGCACAGAATCGCTTCATTGAATTCGCCCGCTTCGAT
GGCACCTCCCAAGTGGTATGCAACGAACGGATAACGTGTTTTAAATGCTT
CCCG
UFO12305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sin1-RA | 2027 | CG10105-RA | 82..785 | 7..704 | 3290 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14411906..14412564 | 7..666 | 3160 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:11:42 has no hits.
UFO12305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:31:56 Download gff for
UFO12305.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sin1-RA | 91..799 | 1..704 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:32 Download gff for
UFO12305.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sin1-RA | 77..785 | 1..704 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:06 Download gff for
UFO12305.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sin1-RA | 77..785 | 1..704 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:06 Download gff for
UFO12305.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14411901..14412609 | 1..704 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:32 Download gff for
UFO12305.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10299406..10300114 | 1..704 | 98 | | Plus |