UFO12312.5prime Sequence
414 bp (295 high quality bases) assembled on 2012-10-16
> UFO12312.5prime
AGTCGACATGAAGGCGCCACATAGTGCAACATATCAGGATAACTATGCTG
ATGCGGCCATGACAGCCAGGACACGGCCAAGCATGGACATGGATCAGCAG
CGAAATCGAAATCAGGCGGAGCTGAGGCTCCTGCCCGCCCAGCGCACCTC
CACCTCCGCCTTTGAATCCCCCGACTTGCGGTTCAACAAGGCTCGCCGCC
GGCGGAGAAGCGAGCAAGTGCCCTCCCGTTGGTCGTGGAATTACCGTCGC
CTCCCTACCGGCGTGCTCATCGTTCAGCGCCCCTGCTTGTTCAGTCTCTG
GCGGGCCAGTTTCCGTGACGCCTCCAGCGCCCGGGATTTCAGAGCTAGAA
TGGATATCGCAAAACTTTTTTTCTACAAACCTCCGCGCAGGTGGTTCACC
CCGGACTTGATTTG
UFO12312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nrx-1-RI | 9643 | CG7050-RI | 1008..1344 | 8..366 | 1255 | 93.3 | Plus |
| Nrx-1-RH | 9353 | CG7050-RH | 1008..1344 | 8..366 | 1255 | 93.3 | Plus |
| Nrx-1-RG | 6451 | CG7050-RG | 1305..1641 | 8..366 | 1255 | 93.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:11:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22470485..22470699 | 8..222 | 1075 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:11:31 has no hits.
UFO12312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:31:53 Download gff for
UFO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RB | 641..968 | 1..349 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:26 Download gff for
UFO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RF | 996..1323 | 1..349 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:01 Download gff for
UFO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RG | 1300..1627 | 1..349 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:01 Download gff for
UFO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22470480..22470807 | 1..349 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:26 Download gff for
UFO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18296202..18296529 | 1..349 | 93 | | Plus |
