UFO12315.5prime Sequence
708 bp (562 high quality bases) assembled on 2012-10-16
> UFO12315.5prime
AGTCGACATGGCACGCCCAATTTTTCCGAACCAGCAGAAGATAGCTGAGA
AACTAATCATCTTGAATGACCGCGGCCTGGGCATTCTTACGCGGATATAC
AACATCAAGAAAGCATGCGGCGACACCAAGTCGAAGCCAGGCTTCCTCTC
CGAGAAGTCGTTGGAATCGAGCATCAAGTTTATCGTGAAGCGGTTCCCCA
ACATCGACGTCAAAGGGCTCAATGCTATTGTAAACATCAAAGCGGAGATT
ATTAAGTCGCTGTCCCTGTATTACCACACATTCGTGGACCTACTTGATTT
CAAGGACAATGTATGCGAACTGCTCACCACGATGGACGCCTGCCAGATTC
ACCTGGACATCACATTGAACTTCGAGCTGACCAAATATTATCTGGACTTG
GTTGGGACCTACGTGTCCTTGATGATTGTTTTGTCTAGGGTCGAGGACCG
CAAGGCAGTTCTGGGCTTGTACAATGCCGCCTACGAGCTGCAAACATCAG
GCGGACACGGGCTTCCCCGCTTGGGGCAGATGATTCTGGACTACGAGGTC
CCTTAAAAAGTTGGCGAGGATTCATTCCCCACAGCGCTGCTACAGTGCGT
TGCGGTCGCTGACCTCATCTATGCACTGCGAACTGCAGCAGACAGTGGAG
GGAAATGCAAAGTGAGTCTGGTAGCATCGCATCTCCTAGGCGTCCGCACT
GACCATGT
UFO12315.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hem-RA | 3777 | CG5837-RA | 209..893 | 8..674 | 2980 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22287351..22287987 | 632..8 | 2645 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:04 has no hits.
UFO12315.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:03 Download gff for
UFO12315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hem-RA | 206..942 | 1..708 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:48 Download gff for
UFO12315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hem-RA | 202..938 | 1..708 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:19 Download gff for
UFO12315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hem-RA | 202..938 | 1..708 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:19 Download gff for
UFO12315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22287258..22287994 | 1..708 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:48 Download gff for
UFO12315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22280358..22281094 | 1..708 | 95 | | Minus |