UFO12316.5prime Sequence
1054 bp (947 high quality bases) assembled on 2012-10-16
> UFO12316.5prime
AGTCGACATGGAGGCAAAGGTGCACCGCCAGCATCAACGGCATCGTCGCA
CGGAGGCGCGACAGCGGCGCCTGGAACGGGAGGCGGTGGCTACGGGAGCG
GCAGCTCCAACGCCCACCACGCCCGAGCGGGCAGAGGCCTTGGACTGTGC
CACAGCCCTCAACGAGGGCGTGGTATCCGCGGATCCGGGCGGCAGCGGCG
GTACGCCAAGCAGTGCGGGTCGCATCAGTGCCCAGAGCTCGGCGGACAGC
ATAGAGCTGGTGGGTTCGCCCAGCCAGACGTCGCAGCAAACGGTGGTGCT
GGTCAACGGCCACGCCCCGCCGGGCCAGGAGGAGGGGGAGGAGGAGTCGC
CACTGGGCGCAGGCAATACCAGGGACTCACCGCCGCCGCCCAAGCAGAGC
GATGGCAGTCGCAACTCATCCGGCGATGCGATGAGTCTGCGGGAGACCCT
GCAGCAACTACCGGCCACCCATCACCATCGGTCCAGGCGAACTCACTCAC
CTGCTGATCCCGATGCGTCCTTTCATCGCGGAATACTTGGGTACATGGAC
CGGGAGCTCAAGCAGAGCTCTCCCACGCCCTCCGCCCCCGCCGGAACCGG
AAACGGAACTGGAAACGGAACTAGCACGGGCGCATCGAGAAAACAGCAGT
CCCTCTCCGACCCACAGGCCAGTCCCGCCCAGCGATCCCTGCGTTCGAGG
AGCAGCTTCGACAAGAGTCCGCGGCGCAAAAGGAGCAAGTCGGAGTCTCG
GCGGAGACGCGAACGGAAGCTAATAGCCGCCGGAGAGATGGAGGTCCGGC
AGGCCAACGAAACCCTGATGCGGTACCTCAAGCAGTGCTCCGACATGCAC
GACGCCTCGCTTTCCGGCGAACTCGAGATCGACCAGAGCCTCGAGGAGAG
ACGCGTCCCCGGAAGACCAAGTCGCAAGGACAGCGGGGCCAGCTAATCCT
CAAGCTGTACTCAGCAGCGTATTATCCTCGATCTGAAGGAAGCCTGGCCG
ATGAACTAAGCTCCGGCGGATGGCCGAGGAGAAATCTACATCCATTTATG
CGGT
UFO12316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14186-RA | 3522 | CG14186-RA | 461..1494 | 1..1032 | 4785 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20102416..20103367 | 948..1 | 4565 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:07 has no hits.
UFO12316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:04 Download gff for
UFO12316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 441..1438 | 1..993 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:50 Download gff for
UFO12316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 461..1458 | 1..993 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:21 Download gff for
UFO12316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 461..1458 | 1..993 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:21 Download gff for
UFO12316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20102417..20103367 | 1..947 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:50 Download gff for
UFO12316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20095517..20096467 | 1..947 | 99 | | Minus |
